Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AP000770.2-201ENST00000623694 100 ntBASIC5.12□□□□□ -1.59
CCDC38Q502W7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC38Q502W7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CCDC38Q502W7 MAPK10-304ENST00000641341 3984 ntBASIC5.12□□□□□ -1.59
CCDC38Q502W7 AL592182.3-201ENST00000642132 3304 ntBASIC5.12□□□□□ -1.59
CCDC38Q502W7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC38Q502W7 DDX18P3-201ENST00000404856 2007 ntBASIC5.12□□□□□ -1.59
CCDC38Q502W7 SAGE2P-201ENST00000420011 2126 ntBASIC5.12□□□□□ -1.59
CCDC38Q502W7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC38Q502W7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC38Q502W7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC38Q502W7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 CR788268.1-201ENST00000603931 1809 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 RNU6-413P-201ENST00000384115 107 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 LRRC37BP1-201ENST00000398851 714 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AP002530.1-201ENST00000405705 684 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 RN7SKP114-201ENST00000410327 279 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 RPL21P108-201ENST00000413857 481 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AL355433.1-201ENST00000422804 300 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC233981.1-201ENST00000423224 461 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 DPRXP1-201ENST00000426312 460 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 Z93242.1-201ENST00000427102 353 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AL450023.3-201ENST00000440592 271 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 CR769776.1-201ENST00000441254 787 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 Z99714.1-201ENST00000450463 807 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 HMGB3P21-201ENST00000452483 547 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC092647.2-201ENST00000452998 253 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 RPS3AP53-201ENST00000454716 778 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC074029.1-201ENST00000552531 1044 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC068446.3-201ENST00000555285 382 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AL158211.1-201ENST00000566763 763 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 MIR3176-201ENST00000582210 90 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC005191.1-201ENST00000603950 358 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC133552.5-201ENST00000604266 540 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 SDR42E1P1-201ENST00000611327 477 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 uc_338.18-201ENST00000615451 175 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 MFSD8-220ENST00000641243 1422 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC38Q502W7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 AC107081.3-201ENST00000612715 2034 ntBASIC5.11□□□□□ -1.59
CCDC38Q502W7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC38Q502W7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC107068.1-201ENST00000563286 4218 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 SNORA17.1-201ENST00000362945 126 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 RNU6-171P-201ENST00000384354 107 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL139098.1-201ENST00000407291 389 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 MIR1286-201ENST00000408112 78 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 FABP7P2-201ENST00000429946 379 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL513175.1-201ENST00000431492 780 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 RPS29P9-201ENST00000440360 171 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AURKAPS1-201ENST00000451805 1212 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL691482.1-201ENST00000453255 87 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms