Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.52□□□□□ -1.85
UBA52P62987 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.52□□□□□ -1.85
UBA52P62987 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.52□□□□□ -1.85
UBA52P62987 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
UBA52P62987 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.52□□□□□ -1.85
UBA52P62987 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 VPS35P1-201ENST00000563400 1518 ntBASIC3.51□□□□□ -1.85
UBA52P62987 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 MIR372-201ENST00000362225 67 ntBASIC3.51□□□□□ -1.85
UBA52P62987 SNORA62.3-201ENST00000365110 153 ntBASIC3.51□□□□□ -1.85
UBA52P62987 RNA5SP283-201ENST00000365604 119 ntBASIC3.51□□□□□ -1.85
UBA52P62987 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.51□□□□□ -1.85
UBA52P62987 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 AL161909.1-201ENST00000397390 712 ntBASIC3.51□□□□□ -1.85
UBA52P62987 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 AL451062.2-201ENST00000427515 271 ntBASIC3.51□□□□□ -1.85
UBA52P62987 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 AL117339.2-201ENST00000430475 180 ntBASIC3.51□□□□□ -1.85
UBA52P62987 RPL23AP52-201ENST00000439311 478 ntBASIC3.51□□□□□ -1.85
UBA52P62987 AC006326.1-201ENST00000445465 787 ntBASIC3.51□□□□□ -1.85
UBA52P62987 MTCO3P16-201ENST00000454456 754 ntBASIC3.51□□□□□ -1.85
UBA52P62987 MTCO3P20-201ENST00000454926 688 ntBASIC3.51□□□□□ -1.85
UBA52P62987 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.51□□□□□ -1.85
UBA52P62987 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UBA52P62987 IGHV3-32-201ENST00000519182 355 ntBASIC3.51□□□□□ -1.85
UBA52P62987 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.51□□□□□ -1.85
UBA52P62987 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.51□□□□□ -1.85
UBA52P62987 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.51□□□□□ -1.85
UBA52P62987 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 AC122134.1-201ENST00000565664 1104 ntBASIC3.51□□□□□ -1.85
UBA52P62987 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 AC079587.1-201ENST00000603846 277 ntBASIC3.51□□□□□ -1.85
UBA52P62987 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.51□□□□□ -1.85
UBA52P62987 AC245100.2-201ENST00000454544 1679 ntBASIC3.51□□□□□ -1.85
UBA52P62987 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBA52P62987 MARK2P15-201ENST00000432204 2186 ntBASIC3.51□□□□□ -1.85
UBA52P62987 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UBA52P62987 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBA52P62987 RPS27AP11-201ENST00000402798 447 ntBASIC3.5□□□□□ -1.85
UBA52P62987 RAB9AP4-201ENST00000415230 609 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.5□□□□□ -1.85
UBA52P62987 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.5□□□□□ -1.85
UBA52P62987 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.5□□□□□ -1.85
UBA52P62987 ARAFP1-201ENST00000422172 605 ntBASIC3.5□□□□□ -1.85
UBA52P62987 BTF3P10-201ENST00000433415 495 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.5□□□□□ -1.85
UBA52P62987 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.5□□□□□ -1.85
UBA52P62987 AC022034.3-201ENST00000471393 478 ntBASIC3.5□□□□□ -1.85
UBA52P62987 RN7SL132P-201ENST00000478131 296 ntBASIC3.5□□□□□ -1.85
UBA52P62987 RN7SL812P-201ENST00000493791 279 ntBASIC3.5□□□□□ -1.85
UBA52P62987 RPS27AP13-201ENST00000498403 237 ntBASIC3.5□□□□□ -1.85
UBA52P62987 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.5□□□□□ -1.85
UBA52P62987 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
UBA52P62987 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.5□□□□□ -1.85
UBA52P62987 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.5□□□□□ -1.85
UBA52P62987 AC010547.7-201ENST00000570323 333 ntBASIC3.5□□□□□ -1.85
UBA52P62987 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
UBA52P62987 EIF1P6-201ENST00000600054 334 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.5□□□□□ -1.85
UBA52P62987 AC025175.1-201ENST00000606482 759 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.5□□□□□ -1.85
UBA52P62987 AC006133.1-201ENST00000617106 264 ntBASIC3.5□□□□□ -1.85
UBA52P62987 MIR6891-201ENST00000618788 93 ntBASIC3.5□□□□□ -1.85
UBA52P62987 AC095038.2-201ENST00000621464 1070 ntBASIC3.5□□□□□ -1.85
UBA52P62987 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.5□□□□□ -1.85
UBA52P62987 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.5□□□□□ -1.85
UBA52P62987 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.5□□□□□ -1.85
UBA52P62987 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.5□□□□□ -1.85
UBA52P62987 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
UBA52P62987 Z82217.1-201ENST00000625157 8149 ntBASIC3.49□□□□□ -1.85
UBA52P62987 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBA52P62987 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
UBA52P62987 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBA52P62987 PRO1804-201ENST00000623780 2050 ntBASIC3.49□□□□□ -1.85
UBA52P62987 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms