Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 MTND2P38-201ENST00000522536 667 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.58□□□□□ -1.52
EIF4A1P60842 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.58□□□□□ -1.52
EIF4A1P60842 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.58□□□□□ -1.52
EIF4A1P60842 MTCYBP23-201ENST00000558717 1102 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.58□□□□□ -1.52
EIF4A1P60842 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.58□□□□□ -1.52
EIF4A1P60842 AL591034.3-201ENST00000605511 685 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 RNU4-5P-201ENST00000607255 135 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 Z98200.1-201ENST00000607298 470 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 AC009464.1-201ENST00000615731 469 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 MIR8059-201ENST00000620427 81 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.58□□□□□ -1.52
EIF4A1P60842 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 SMG1P4-204ENST00000523028 4131 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.58□□□□□ -1.52
EIF4A1P60842 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
EIF4A1P60842 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.58□□□□□ -1.52
EIF4A1P60842 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EIF4A1P60842 MFSD8-220ENST00000641243 1422 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 NOL8P1-201ENST00000508336 3529 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
EIF4A1P60842 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 RNA5SP175-201ENST00000364275 119 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC104297.1-201ENST00000393779 870 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 ATP5F1P2-201ENST00000398143 760 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 RNA5SP36-201ENST00000410197 133 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 MTATP6P20-201ENST00000414147 562 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 RPL6P29-201ENST00000414863 865 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 VPS26BP1-201ENST00000417155 755 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL358176.3-201ENST00000420757 454 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 COX6CP15-201ENST00000426313 211 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 BTF3P10-201ENST00000433415 495 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL035246.1-201ENST00000433554 1255 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC023512.1-201ENST00000444513 499 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.57□□□□□ -1.52
EIF4A1P60842 MTND1P31-201ENST00000449206 961 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC107398.1-201ENST00000486904 505 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.57□□□□□ -1.52
EIF4A1P60842 MTCO1P35-201ENST00000515270 228 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 FTH1P11-201ENST00000517577 551 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 MTND3P12-201ENST00000559068 328 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 AC234772.3-201ENST00000602277 528 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 FAM27D1-201ENST00000612308 341 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
EIF4A1P60842 ZYXP1-201ENST00000617638 118 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AC015871.5-202ENST00000623252 701 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.57□□□□□ -1.52
EIF4A1P60842 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.57□□□□□ -1.52
EIF4A1P60842 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 CASC19-204ENST00000641001 2055 ntBASIC5.57□□□□□ -1.52
EIF4A1P60842 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EIF4A1P60842 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.56□□□□□ -1.52
EIF4A1P60842 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EIF4A1P60842 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EIF4A1P60842 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EIF4A1P60842 RN7SKP74-201ENST00000362849 309 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 RNU4-7P-201ENST00000364758 141 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 RNU1-13P-201ENST00000384499 162 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 RPS26P8-201ENST00000393490 348 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.56□□□□□ -1.52
EIF4A1P60842 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.56□□□□□ -1.52
EIF4A1P60842 RPL23AP25-201ENST00000430973 463 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 CETN4P-201ENST00000432407 469 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.56□□□□□ -1.52
EIF4A1P60842 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.56□□□□□ -1.52
EIF4A1P60842 VN1R32P-201ENST00000452234 905 ntBASIC5.56□□□□□ -1.52
EIF4A1P60842 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms