Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC083899.2-201ENST00000423285 1376 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AL118496.1-201ENST00000440201 1812 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 RNA5SP505-201ENST00000364748 108 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 RPS27AP11-201ENST00000402798 447 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 NRBF2P2-201ENST00000413087 861 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 RANP4-201ENST00000413361 655 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.02□□□□□ -1.77
PKNOX1P55347 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 RPS29P17-201ENST00000430795 166 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC011742.1-201ENST00000431448 434 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.02□□□□□ -1.77
PKNOX1P55347 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 AL138878.2-201ENST00000440581 1241 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 HMGB1P16-201ENST00000447155 540 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.02□□□□□ -1.77
PKNOX1P55347 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC109327.1-201ENST00000471666 403 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 RPL31P61-201ENST00000496160 376 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC109458.1-201ENST00000508858 316 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC008958.1-201ENST00000511047 682 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.02□□□□□ -1.77
PKNOX1P55347 SMARCE1P4-201ENST00000523647 241 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.02□□□□□ -1.77
PKNOX1P55347 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.02□□□□□ -1.77
PKNOX1P55347 SS18L2P2-201ENST00000583960 235 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.02□□□□□ -1.77
PKNOX1P55347 AC007423.1-201ENST00000605009 627 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 KATNBL1P1-201ENST00000605192 748 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC024940.4-201ENST00000605507 246 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AL391834.1-201ENST00000609609 560 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 Mico1.1-201ENST00000611698 204 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.02□□□□□ -1.77
PKNOX1P55347 MIR7703-201ENST00000620784 77 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 AP003497.2-201ENST00000624220 967 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 MFSD8-216ENST00000641147 4009 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 AL592437.2-201ENST00000421655 2434 ntBASIC4.02□□□□□ -1.77
PKNOX1P55347 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
PKNOX1P55347 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKNOX1P55347 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 MAPK10-373ENST00000641983 6772 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC027287.1-201ENST00000553115 1453 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PKNOX1P55347 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PKNOX1P55347 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 RNA5SP322-201ENST00000363617 119 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PKNOX1P55347 NPM1P10-201ENST00000398310 865 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 Z86062.1-201ENST00000406773 777 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 SEC63P1-201ENST00000425785 1258 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC234779.1-201ENST00000425910 285 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AF228730.2-201ENST00000438784 848 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC023512.1-201ENST00000444513 499 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 Z95152.1-201ENST00000453556 656 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.01□□□□□ -1.77
PKNOX1P55347 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 RN7SL271P-201ENST00000487601 295 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC231760.1-201ENST00000498002 260 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 SNORD116-26-201ENST00000516006 96 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 RNU6-362P-201ENST00000516736 90 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC008083.2-201ENST00000546707 476 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.01□□□□□ -1.77
PKNOX1P55347 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC068831.4-201ENST00000556118 109 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC079171.1-201ENST00000568788 914 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 MIR4715-201ENST00000584117 79 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC242628.1-201ENST00000606810 391 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AC239803.2-201ENST00000610161 430 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.01□□□□□ -1.77
PKNOX1P55347 AC016957.2-201ENST00000616998 848 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.01□□□□□ -1.77
PKNOX1P55347 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PKNOX1P55347 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PKNOX1P55347 DDX6P1-205ENST00000441966 1436 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 AL359715.4-201ENST00000606629 1436 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms