Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC009948.4-201ENST00000604692 675 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH13P55290 SDR42E1P1-201ENST00000611327 477 ntBASIC4.45□□□□□ -1.7
CDH13P55290 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC091905.2-201ENST00000623143 306 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC073342.3-201ENST00000624211 193 ntBASIC4.45□□□□□ -1.7
CDH13P55290 BX649567.1-201ENST00000642071 1134 ntBASIC4.45□□□□□ -1.7
CDH13P55290 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CDH13P55290 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 AC025263.3-201ENST00000622965 1396 ntBASIC4.44□□□□□ -1.7
CDH13P55290 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH13P55290 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 RNU1-108P-201ENST00000362556 161 ntBASIC4.44□□□□□ -1.7
CDH13P55290 RN7SKP149-201ENST00000363008 344 ntBASIC4.44□□□□□ -1.7
CDH13P55290 RNU5E-10P-201ENST00000363506 118 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AL512430.2-201ENST00000406786 339 ntBASIC4.44□□□□□ -1.7
CDH13P55290 EIF4A1P3-201ENST00000411521 244 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH13P55290 RPS26P40-201ENST00000435209 294 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 GEMIN8P3-201ENST00000445417 720 ntBASIC4.44□□□□□ -1.7
CDH13P55290 RPS27AP15-201ENST00000447672 466 ntBASIC4.44□□□□□ -1.7
CDH13P55290 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 AC090013.1-201ENST00000485147 480 ntBASIC4.44□□□□□ -1.7
CDH13P55290 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 OR5M14P-201ENST00000506803 618 ntBASIC4.44□□□□□ -1.7
CDH13P55290 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 AC008885.2-201ENST00000509506 930 ntBASIC4.44□□□□□ -1.7
CDH13P55290 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 OR8I1P-201ENST00000529291 931 ntBASIC4.44□□□□□ -1.7
CDH13P55290 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
CDH13P55290 ZNF971P-201ENST00000562068 1249 ntBASIC4.44□□□□□ -1.7
CDH13P55290 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 MTCO1P40-201ENST00000574371 625 ntBASIC4.44□□□□□ -1.7
CDH13P55290 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
CDH13P55290 MIR4512-201ENST00000583257 77 ntBASIC4.44□□□□□ -1.7
CDH13P55290 OR7E18P-201ENST00000592589 702 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 AC133644.2-201ENST00000608142 540 ntBASIC4.44□□□□□ -1.7
CDH13P55290 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH13P55290 AL353726.1-201ENST00000614041 1000 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 U3.53-201ENST00000628922 216 ntBASIC4.44□□□□□ -1.7
CDH13P55290 AC055839.1-201ENST00000634467 498 ntBASIC4.44□□□□□ -1.7
CDH13P55290 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
CDH13P55290 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH13P55290 AC007529.1-201ENST00000418574 2178 ntBASIC4.44□□□□□ -1.7
CDH13P55290 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CDH13P55290 AC017104.4-201ENST00000636283 1592 ntBASIC4.44□□□□□ -1.7
CDH13P55290 NXPH1-205ENST00000602349 1953 ntBASIC4.44□□□□□ -1.7
CDH13P55290 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH13P55290 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDH13P55290 AL590240.1-201ENST00000334118 313 ntBASIC4.43□□□□□ -1.7
CDH13P55290 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.43□□□□□ -1.7
CDH13P55290 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH13P55290 RNU1-63P-201ENST00000383902 164 ntBASIC4.43□□□□□ -1.7
CDH13P55290 Z98745.1-201ENST00000402553 494 ntBASIC4.43□□□□□ -1.7
CDH13P55290 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 FCF1P5-201ENST00000406490 482 ntBASIC4.43□□□□□ -1.7
CDH13P55290 SPTLC1P2-201ENST00000407089 121 ntBASIC4.43□□□□□ -1.7
CDH13P55290 RN7SKP100-201ENST00000411258 284 ntBASIC4.43□□□□□ -1.7
CDH13P55290 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 ATG4AP1-201ENST00000416893 538 ntBASIC4.43□□□□□ -1.7
CDH13P55290 AC004690.1-201ENST00000418216 328 ntBASIC4.43□□□□□ -1.7
CDH13P55290 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH13P55290 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 AL009174.1-201ENST00000426577 416 ntBASIC4.43□□□□□ -1.7
CDH13P55290 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.43□□□□□ -1.7
CDH13P55290 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH13P55290 CEACAMP1-201ENST00000434624 1035 ntBASIC4.43□□□□□ -1.7
CDH13P55290 AL627308.1-201ENST00000435693 821 ntBASIC4.43□□□□□ -1.7
CDH13P55290 HMGB1P45-201ENST00000435986 653 ntBASIC4.43□□□□□ -1.7
CDH13P55290 AC016831.4-201ENST00000438302 307 ntBASIC4.43□□□□□ -1.7
CDH13P55290 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH13P55290 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH13P55290 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH13P55290 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH13P55290 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms