Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.51□□□□□ -1.69
CDH12P55289 U3.36-201ENST00000408418 213 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RNU2-6P-201ENST00000411404 190 ntBASIC4.51□□□□□ -1.69
CDH12P55289 MFSD13B-201ENST00000420133 1290 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC090960.1-201ENST00000421072 306 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC011233.1-201ENST00000422812 283 ntBASIC4.51□□□□□ -1.69
CDH12P55289 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH12P55289 RPS24P8-201ENST00000431490 402 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 RPL21P110-201ENST00000433345 446 ntBASIC4.51□□□□□ -1.69
CDH12P55289 UBE2D3P1-201ENST00000436669 444 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
CDH12P55289 NPM1P33-201ENST00000438918 872 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RPS26P2-201ENST00000440331 348 ntBASIC4.51□□□□□ -1.69
CDH12P55289 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 AC002553.2-201ENST00000453217 340 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 AC005229.2-201ENST00000456995 399 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RN7SL222P-201ENST00000476452 299 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC079841.1-201ENST00000481228 950 ntBASIC4.51□□□□□ -1.69
CDH12P55289 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 RN7SL244P-201ENST00000493405 297 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 IGBP1P5-201ENST00000507524 1000 ntBASIC4.51□□□□□ -1.69
CDH12P55289 OR5H4P-201ENST00000510851 923 ntBASIC4.51□□□□□ -1.69
CDH12P55289 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 RNA5SP464-201ENST00000516251 108 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RNA5SP43-201ENST00000516559 110 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH12P55289 MTCO1P47-201ENST00000523889 1271 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC135279.1-201ENST00000543493 504 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 AL358913.1-201ENST00000554342 121 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH12P55289 AC008015.1-201ENST00000555505 465 ntBASIC4.51□□□□□ -1.69
CDH12P55289 DUXAP1-201ENST00000556632 463 ntBASIC4.51□□□□□ -1.69
CDH12P55289 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH12P55289 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH12P55289 AC018552.1-201ENST00000562099 811 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH12P55289 AC090751.1-201ENST00000566966 267 ntBASIC4.51□□□□□ -1.69
CDH12P55289 PIGPP4-201ENST00000584447 307 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC011447.4-201ENST00000587562 111 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL022161.1-201ENST00000604390 213 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH12P55289 SNORD91B-202ENST00000608459 222 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AL353726.1-201ENST00000614041 1000 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC009318.3-201ENST00000616916 503 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC234782.5-201ENST00000617723 324 ntBASIC4.51□□□□□ -1.69
CDH12P55289 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 AC016717.3-201ENST00000624730 554 ntBASIC4.51□□□□□ -1.69
CDH12P55289 MIR4302-201ENST00000638058 60 ntBASIC4.51□□□□□ -1.69
CDH12P55289 AC103706.2-201ENST00000638080 240 ntBASIC4.51□□□□□ -1.69
CDH12P55289 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 AC027228.2-201ENST00000567141 2154 ntBASIC4.51□□□□□ -1.69
CDH12P55289 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.51□□□□□ -1.69
CDH12P55289 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 BRAFP1-201ENST00000445336 2703 ntBASIC4.51□□□□□ -1.69
CDH12P55289 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 AL513185.3-201ENST00000433335 1300 ntBASIC4.5□□□□□ -1.69
CDH12P55289 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.5□□□□□ -1.69
CDH12P55289 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CDH12P55289 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH12P55289 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH12P55289 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH12P55289 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH12P55289 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH12P55289 RNU6-619P-201ENST00000365146 108 ntBASIC4.5□□□□□ -1.69
CDH12P55289 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CDH12P55289 MIR223-201ENST00000385204 110 ntBASIC4.5□□□□□ -1.69
CDH12P55289 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH12P55289 RNU4-72P-201ENST00000410754 173 ntBASIC4.5□□□□□ -1.69
CDH12P55289 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH12P55289 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH12P55289 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH12P55289 AC007435.1-201ENST00000421086 415 ntBASIC4.5□□□□□ -1.69
CDH12P55289 GTF2IP23-201ENST00000423746 351 ntBASIC4.5□□□□□ -1.69
CDH12P55289 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH12P55289 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH12P55289 UBE2V1P1-201ENST00000430836 445 ntBASIC4.5□□□□□ -1.69
CDH12P55289 RPS27P18-201ENST00000431701 247 ntBASIC4.5□□□□□ -1.69
CDH12P55289 MTND4P32-201ENST00000437189 1237 ntBASIC4.5□□□□□ -1.69
CDH12P55289 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH12P55289 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH12P55289 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH12P55289 RPS18P6-201ENST00000476880 458 ntBASIC4.5□□□□□ -1.69
CDH12P55289 AC126121.1-201ENST00000482313 553 ntBASIC4.5□□□□□ -1.69
CDH12P55289 RN7SL30P-201ENST00000488416 306 ntBASIC4.5□□□□□ -1.69
CDH12P55289 DYNLL1P6-201ENST00000503440 264 ntBASIC4.5□□□□□ -1.69
CDH12P55289 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH12P55289 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH12P55289 RFPL4AP5-201ENST00000514977 504 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms