Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TPTE2P3-201ENST00000441562 1189 ntBASIC4.26□□□□□ -1.73
CDH11P55287 NPM1P39-201ENST00000449818 867 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC234781.3-201ENST00000452540 973 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC005229.2-201ENST00000456995 399 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC006967.1-201ENST00000467608 589 ntBASIC4.26□□□□□ -1.73
CDH11P55287 RN7SL738P-201ENST00000470264 297 ntBASIC4.26□□□□□ -1.73
CDH11P55287 RPL23AP65-201ENST00000475608 468 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC008897.1-201ENST00000494006 347 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC020699.1-201ENST00000505161 445 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH11P55287 RN7SKP265-201ENST00000516448 223 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 OR10V3P-201ENST00000525712 725 ntBASIC4.26□□□□□ -1.73
CDH11P55287 MORF4L1P3-201ENST00000525966 950 ntBASIC4.26□□□□□ -1.73
CDH11P55287 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH11P55287 HIGD1AP5-201ENST00000529959 259 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH11P55287 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH11P55287 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH11P55287 POLR2KP1-201ENST00000553226 168 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH11P55287 AC027455.1-201ENST00000574104 594 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC020910.3-201ENST00000603701 874 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AL445435.1-201ENST00000604232 665 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AL450336.1-201ENST00000605180 586 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC009974.1-201ENST00000608881 455 ntBASIC4.26□□□□□ -1.73
CDH11P55287 MIR6798-201ENST00000612887 67 ntBASIC4.26□□□□□ -1.73
CDH11P55287 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH11P55287 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 AC006927.4-201ENST00000639187 543 ntBASIC4.26□□□□□ -1.73
CDH11P55287 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 BX649567.1-201ENST00000642071 1134 ntBASIC4.26□□□□□ -1.73
CDH11P55287 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH11P55287 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 DDX18P3-201ENST00000404856 2007 ntBASIC4.26□□□□□ -1.73
CDH11P55287 NSRP1P1-201ENST00000444067 1693 ntBASIC4.26□□□□□ -1.73
CDH11P55287 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 AC073055.1-201ENST00000456901 1621 ntBASIC4.25□□□□□ -1.73
CDH11P55287 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 RNA5SP191-201ENST00000362585 102 ntBASIC4.25□□□□□ -1.73
CDH11P55287 RNU6-549P-201ENST00000384433 107 ntBASIC4.25□□□□□ -1.73
CDH11P55287 ANAPC10P1-201ENST00000395991 556 ntBASIC4.25□□□□□ -1.73
CDH11P55287 MTCO1P56-201ENST00000401674 224 ntBASIC4.25□□□□□ -1.73
CDH11P55287 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 RNA5SP146-201ENST00000410743 123 ntBASIC4.25□□□□□ -1.73
CDH11P55287 GTF2IP5-201ENST00000414608 731 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AL590139.1-201ENST00000416267 400 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 AC019050.1-201ENST00000418508 492 ntBASIC4.25□□□□□ -1.73
CDH11P55287 PDSS1P1-201ENST00000422953 1114 ntBASIC4.25□□□□□ -1.73
CDH11P55287 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.25□□□□□ -1.73
CDH11P55287 CDY14P-201ENST00000431260 1014 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 CDY12P-201ENST00000440679 1015 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC009263.1-201ENST00000441193 1239 ntBASIC4.25□□□□□ -1.73
CDH11P55287 CEACAMP9-201ENST00000442990 513 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 CDY13P-201ENST00000445813 1015 ntBASIC4.25□□□□□ -1.73
CDH11P55287 CASP3P1-201ENST00000446037 609 ntBASIC4.25□□□□□ -1.73
CDH11P55287 CDY23P-201ENST00000451661 1014 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 IGLV2-34-201ENST00000490007 283 ntBASIC4.25□□□□□ -1.73
CDH11P55287 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
CDH11P55287 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 STMN1P2-201ENST00000508435 439 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC008837.1-201ENST00000511513 412 ntBASIC4.25□□□□□ -1.73
CDH11P55287 RNA5SP392-201ENST00000516905 112 ntBASIC4.25□□□□□ -1.73
CDH11P55287 Y_RNA.717-201ENST00000517106 92 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 MTCYBP23-201ENST00000558717 1102 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC209154.1-201ENST00000582156 337 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms