Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC073069.1-201ENST00000428657 441 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 GTF2IP3-201ENST00000433887 494 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 USP9YP24-201ENST00000434374 697 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 USP9YP17-201ENST00000444617 696 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 HMGB3P16-201ENST00000508037 287 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 RNA5SP303-201ENST00000516192 130 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 NDUFS5P6-201ENST00000529136 295 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC006518.2-201ENST00000542513 940 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.61□□□□□ -1.67
CLCNKAP51800 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC090525.3-201ENST00000605601 189 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC079395.3-201ENST00000615161 484 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 uc_338.18-201ENST00000615451 175 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AP000346.3-201ENST00000622821 210 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC007342.8-201ENST00000623278 678 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AL049555.1-201ENST00000562834 1933 ntBASIC4.61□□□□□ -1.67
CLCNKAP51800 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLCNKAP51800 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCNKAP51800 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLCNKAP51800 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCNKAP51800 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCNKAP51800 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCNKAP51800 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCNKAP51800 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCNKAP51800 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 RNU6-543P-201ENST00000362576 108 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RNA5SP505-201ENST00000364748 108 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RPL23AP59-201ENST00000399415 461 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 RPL7P57-201ENST00000423238 740 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 ARL5AP2-201ENST00000444698 533 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AL162591.2-201ENST00000449634 317 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC108463.1-201ENST00000450258 347 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCNKAP51800 RNU7-27P-201ENST00000459281 62 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC090142.1-201ENST00000465776 462 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RN7SL354P-201ENST00000469282 294 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RN7SL738P-201ENST00000470264 297 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RPL36AP41-201ENST00000493820 306 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 OR5AN2P-201ENST00000534535 896 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 RN7SL52P-201ENST00000584271 284 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC068313.1-201ENST00000604028 1008 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC024060.1-201ENST00000607052 494 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC013468.1-201ENST00000608680 598 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC009318.3-201ENST00000616916 503 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RN7SL722P-201ENST00000617780 284 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RN7SL565P-201ENST00000618246 284 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC015804.1-201ENST00000622935 435 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AC138907.10-201ENST00000623708 983 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCNKAP51800 LINC01808-202ENST00000641680 1116 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCNKAP51800 MFSD8-220ENST00000641243 1422 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 AL445487.1-201ENST00000415694 1580 ntBASIC4.6□□□□□ -1.67
CLCNKAP51800 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCNKAP51800 AC022893.2-201ENST00000564832 3296 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms