Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC091304.5-201ENST00000568969 158 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC087575.1-201ENST00000585087 229 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC105224.1-201ENST00000587055 421 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 BNIP3P16-201ENST00000589779 534 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 GLUD1P4-201ENST00000590914 418 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF144AP50876 AC092032.1-201ENST00000603090 165 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF144AP50876 AC006157.1-201ENST00000611750 366 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 U2.1-201ENST00000618978 145 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC005899.6-201ENST00000620729 297 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF144AP50876 AC012629.3-201ENST00000623397 328 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF144AP50876 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RNF144AP50876 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RNF144AP50876 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RNF144AP50876 RNU6-1252P-201ENST00000363054 104 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 MIR454-201ENST00000390180 115 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 SOD2P1-201ENST00000396543 562 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AL139397.2-201ENST00000404529 772 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RNA5SP345-201ENST00000410646 108 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RNU6-954P-201ENST00000411355 107 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 HMGN3P1-201ENST00000453847 193 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.4□□□□□ -1.38
RNF144AP50876 RPS29P15-201ENST00000458329 171 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC079168.1-201ENST00000458741 345 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC128716.1-201ENST00000475129 166 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF144AP50876 RPL23AP41-201ENST00000484754 458 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC058823.1-201ENST00000485315 474 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RPS4XP14-201ENST00000493072 781 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RN7SKP242-201ENST00000515967 289 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 Y_RNA.668-201ENST00000516233 93 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RNU6-406P-201ENST00000516470 107 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 SCARNA18.2-201ENST00000516882 84 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC103843.2-201ENST00000530523 682 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 LARP7P2-201ENST00000575306 125 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RN7SL689P-201ENST00000577215 297 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 MIR5095-201ENST00000578844 88 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 RN7SL131P-201ENST00000579043 256 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC017100.2-201ENST00000584628 355 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 MIR4428-201ENST00000584884 73 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF144AP50876 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC092960.1-201ENST00000604762 351 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF144AP50876 OR6R2P-201ENST00000609216 300 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 AC087894.3-201ENST00000623682 349 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF144AP50876 CDRT1-208ENST00000630868 794 ntBASIC6.4□□□□□ -1.38
RNF144AP50876 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
RNF144AP50876 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF144AP50876 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.4□□□□□ -1.39
RNF144AP50876 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.4□□□□□ -1.39
RNF144AP50876 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
RNF144AP50876 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
RNF144AP50876 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.4□□□□□ -1.39
RNF144AP50876 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF144AP50876 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms