Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BRCC3P46736 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.41□□□□□ -1.7
BRCC3P46736 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
BRCC3P46736 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRCC3P46736 AC010329.2-201ENST00000595195 2737 ntBASIC4.4□□□□□ -1.7
BRCC3P46736 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BRCC3P46736 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRCC3P46736 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.7
BRCC3P46736 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.4□□□□□ -1.7
BRCC3P46736 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BRCC3P46736 CASC19-261ENST00000641853 1638 ntBASIC4.4□□□□□ -1.7
BRCC3P46736 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 SNORA27.3-201ENST00000364937 134 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 SNORA40.4-201ENST00000390971 128 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.4□□□□□ -1.71
BRCC3P46736 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCC3P46736 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 RPL7P2-201ENST00000427639 268 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 AC073335.1-201ENST00000427776 363 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.4□□□□□ -1.71
BRCC3P46736 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 MTND4P15-201ENST00000437913 1033 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC005008.1-201ENST00000456151 612 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 RPL5P13-201ENST00000462840 709 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC010460.1-201ENST00000507087 466 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC053481.4-201ENST00000583164 216 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC091948.2-201ENST00000636510 279 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCC3P46736 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 AC017002.4-201ENST00000604721 1525 ntBASIC4.4□□□□□ -1.71
BRCC3P46736 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCC3P46736 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCC3P46736 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRCC3P46736 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRCC3P46736 CASC19-284ENST00000642142 1868 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.39□□□□□ -1.71
BRCC3P46736 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 RNU1-15P-201ENST00000353977 144 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 RNU6-40P-201ENST00000384254 107 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 RNU6-883P-201ENST00000384597 107 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRCC3P46736 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRCC3P46736 AL445189.1-201ENST00000405722 338 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 CEACAMP8-201ENST00000413902 580 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 FAR1P1-201ENST00000427163 934 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.39□□□□□ -1.71
BRCC3P46736 TBCAP1-201ENST00000436520 327 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCC3P46736 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
BRCC3P46736 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCC3P46736 AP002345.1-201ENST00000456493 928 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AC079804.1-201ENST00000461922 436 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.39□□□□□ -1.71
BRCC3P46736 RWDD4P1-201ENST00000488019 565 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.39□□□□□ -1.71
BRCC3P46736 STMN1P2-201ENST00000508435 439 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AC108120.2-201ENST00000512973 294 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 MTND4LP31-201ENST00000514859 294 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCC3P46736 NPM1P35-201ENST00000533043 868 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.39□□□□□ -1.71
BRCC3P46736 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCC3P46736 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCC3P46736 AC063950.1-201ENST00000552036 308 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 GLRXP2-201ENST00000555594 321 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.39□□□□□ -1.71
BRCC3P46736 AL133247.2-201ENST00000603236 482 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AC092574.1-201ENST00000609771 420 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 MIR6500-201ENST00000622700 86 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 AL450326.2-201ENST00000421913 1962 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
BRCC3P46736 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
BRCC3P46736 AL122126.1-201ENST00000546905 1318 ntBASIC4.39□□□□□ -1.71
BRCC3P46736 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
BRCC3P46736 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRCC3P46736 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms