Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 RPL36AP15-201ENST00000444514 266 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN9P43378 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC091959.2-201ENST00000477363 321 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 AC083982.1-201ENST00000485679 344 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC105233.1-201ENST00000498840 781 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC010306.1-201ENST00000523223 1117 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 MTCO3P15-201ENST00000526563 574 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 MIR4443-201ENST00000585052 53 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN9P43378 AL137072.1-201ENST00000603444 466 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AC113368.1-201ENST00000603736 382 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 COX6CP4-201ENST00000605798 228 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 BX323046.1-201ENST00000610145 535 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 MIR6730-201ENST00000622213 67 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AC091953.3-201ENST00000623220 236 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AC092608.3-201ENST00000625017 386 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN9P43378 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTPN9P43378 AL590240.1-201ENST00000334118 313 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 RNU4-92P-201ENST00000363783 136 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 SNORD116-12-201ENST00000384468 92 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 TAS2R15P-201ENST00000390674 928 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC119751.3-201ENST00000399720 670 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 SNORA11C-201ENST00000408532 129 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 RNU6-77P-201ENST00000410554 91 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 HMGB1P49-201ENST00000418882 569 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 Z74021.1-201ENST00000423610 407 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 RPL21P43-201ENST00000425440 472 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AL360081.1-201ENST00000428299 555 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 FHP1-201ENST00000442741 703 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC112492.1-201ENST00000449607 712 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN9P43378 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC231760.1-201ENST00000498002 260 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC098799.3-201ENST00000506095 438 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC112673.1-201ENST00000513168 575 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 snoZ278.1-201ENST00000517059 112 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN9P43378 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC139103.1-201ENST00000534696 1030 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC023050.2-201ENST00000544968 387 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN9P43378 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN9P43378 MTND4LP24-201ENST00000572277 291 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC209154.1-201ENST00000582156 337 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC090312.2-201ENST00000582687 378 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC073091.2-201ENST00000603205 907 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC233280.2-201ENST00000603917 1070 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.85□□□□□ -1.63
PTPN9P43378 AL008729.2-201ENST00000606393 473 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC023813.4-201ENST00000607580 580 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC234782.5-201ENST00000617723 324 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC139769.3-201ENST00000618383 175 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 AC011330.2-201ENST00000621680 635 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC010928.1-201ENST00000592477 1447 ntBASIC4.85□□□□□ -1.63
PTPN9P43378 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN9P43378 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN9P43378 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN9P43378 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN9P43378 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN9P43378 AC138393.1-206ENST00000540997 1886 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms