Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS2P33552 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CKS2P33552 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS2P33552 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS2P33552 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.82□□□□□ -1.96
CKS2P33552 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS2P33552 CASC19-284ENST00000642142 1868 ntBASIC2.82□□□□□ -1.96
CKS2P33552 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.81□□□□□ -1.96
CKS2P33552 AC007342.7-201ENST00000624610 2337 ntBASIC2.81□□□□□ -1.96
CKS2P33552 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CKS2P33552 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CKS2P33552 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.81□□□□□ -1.96
CKS2P33552 AC073464.3-201ENST00000422564 712 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AL732292.1-201ENST00000426692 226 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AC073069.1-201ENST00000428657 441 ntBASIC2.81□□□□□ -1.96
CKS2P33552 TEX41-205ENST00000431734 529 ntTSL 4 BASIC2.81□□□□□ -1.96
CKS2P33552 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.81□□□□□ -1.96
CKS2P33552 AC083863.1-201ENST00000438811 231 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AL162151.2-201ENST00000448875 158 ntBASIC2.81□□□□□ -1.96
CKS2P33552 RPL23AP14-201ENST00000468281 468 ntBASIC2.81□□□□□ -1.96
CKS2P33552 RN7SL860P-201ENST00000473738 223 ntBASIC2.81□□□□□ -1.96
CKS2P33552 RN7SL691P-201ENST00000494487 301 ntBASIC2.81□□□□□ -1.96
CKS2P33552 RN7SL101P-201ENST00000496350 279 ntBASIC2.81□□□□□ -1.96
CKS2P33552 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 AC010627.1-201ENST00000503819 1294 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC2.81□□□□□ -1.96
CKS2P33552 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 AC008958.1-201ENST00000511047 682 ntBASIC2.81□□□□□ -1.96
CKS2P33552 NDUFB4P9-201ENST00000511646 388 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.81□□□□□ -1.96
CKS2P33552 ARL2BPP6-201ENST00000512757 439 ntBASIC2.81□□□□□ -1.96
CKS2P33552 OR7H2P-201ENST00000513483 306 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 AL139174.1-201ENST00000531489 886 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC2.81□□□□□ -1.96
CKS2P33552 MIR4738-201ENST00000579134 87 ntBASIC2.81□□□□□ -1.96
CKS2P33552 MIR4646-201ENST00000580775 63 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 VN1R81P-201ENST00000602085 372 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.81□□□□□ -1.96
CKS2P33552 AC090948.1-201ENST00000607464 549 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AL139254.3-201ENST00000641097 674 ntBASIC2.81□□□□□ -1.96
CKS2P33552 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.81□□□□□ -1.96
CKS2P33552 AC066616.2-201ENST00000559334 1481 ntBASIC2.81□□□□□ -1.96
CKS2P33552 RIOK3P1-201ENST00000418778 1528 ntBASIC2.81□□□□□ -1.96
CKS2P33552 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CKS2P33552 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.81□□□□□ -1.96
CKS2P33552 AP002001.2-201ENST00000529025 1469 ntBASIC2.8□□□□□ -1.96
CKS2P33552 DHX40P1-201ENST00000588725 1412 ntBASIC2.8□□□□□ -1.96
CKS2P33552 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS2P33552 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS2P33552 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 RPL23AP59-201ENST00000399415 461 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AMZ2P2-201ENST00000406819 1057 ntBASIC2.8□□□□□ -1.96
CKS2P33552 HSPE1P12-201ENST00000412576 301 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS2P33552 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CKS2P33552 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.8□□□□□ -1.96
CKS2P33552 AC006065.1-201ENST00000422539 802 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RPL23AP4-201ENST00000427757 463 ntBASIC2.8□□□□□ -1.96
CKS2P33552 HIGD1AP12-201ENST00000427832 281 ntBASIC2.8□□□□□ -1.96
CKS2P33552 COX6B1P7-201ENST00000430845 235 ntBASIC2.8□□□□□ -1.96
CKS2P33552 MOB1AP1-201ENST00000430903 535 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS2P33552 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS2P33552 RPS3AP53-201ENST00000454716 778 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RNU6-1218P-201ENST00000458990 108 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RPS3AP41-201ENST00000462701 778 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RN7SL354P-201ENST00000469282 294 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC007537.2-201ENST00000472093 511 ntBASIC2.8□□□□□ -1.96
CKS2P33552 RN7SL481P-201ENST00000477764 299 ntBASIC2.8□□□□□ -1.96
CKS2P33552 MTND6P6-201ENST00000478031 263 ntBASIC2.8□□□□□ -1.96
CKS2P33552 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC2.8□□□□□ -1.96
CKS2P33552 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 AC093763.2-201ENST00000505334 1223 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC026784.1-201ENST00000507986 352 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC106806.2-201ENST00000509365 500 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC099522.1-202ENST00000514718 367 ntBASIC2.8□□□□□ -1.96
CKS2P33552 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 AP000676.2-201ENST00000529711 301 ntBASIC2.8□□□□□ -1.96
CKS2P33552 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS2P33552 AC091516.1-201ENST00000549191 703 ntBASIC2.8□□□□□ -1.96
CKS2P33552 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS2P33552 AC012146.2-201ENST00000576545 416 ntBASIC2.8□□□□□ -1.96
CKS2P33552 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CKS2P33552 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS2P33552 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.8□□□□□ -1.96
CKS2P33552 AL137849.1-201ENST00000604767 169 ntBASIC2.8□□□□□ -1.96
CKS2P33552 AC010857.1-201ENST00000606398 594 ntBASIC2.8□□□□□ -1.96
CKS2P33552 MIR4302-201ENST00000638058 60 ntBASIC2.8□□□□□ -1.96
CKS2P33552 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms