Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 AL592156.1-201ENST00000508758 304 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 MTATP6P9-201ENST00000515039 680 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 AC113192.3-201ENST00000529152 742 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC8P31273 OR8R1P-201ENST00000543943 764 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC8P31273 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC8P31273 AC104072.1-201ENST00000568817 668 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC8P31273 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC8P31273 AC034229.4-201ENST00000607861 441 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 AC018645.2-201ENST00000609151 472 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 SNX18P1Y-201ENST00000616231 511 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 AC022960.3-201ENST00000619794 441 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HOXC8P31273 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC8P31273 AL445363.3-201ENST00000623080 671 ntBASIC4.83□□□□□ -1.64
HOXC8P31273 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC8P31273 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC8P31273 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC8P31273 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC8P31273 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXC8P31273 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC8P31273 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC8P31273 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
HOXC8P31273 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC8P31273 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC8P31273 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXC8P31273 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 AC104260.2-201ENST00000623551 3497 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 MIR134-201ENST00000385258 73 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC8P31273 RN7SKP33-201ENST00000410942 340 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 MFSD13B-201ENST00000420133 1290 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC062016.2-201ENST00000420950 676 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 AC073069.1-201ENST00000428657 441 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 TMX2P1-201ENST00000436507 708 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC8P31273 AL512326.1-201ENST00000443050 721 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 FCF1P6-201ENST00000456841 595 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 RN7SL812P-201ENST00000493791 279 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 VTA1P2-201ENST00000520205 911 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 AC093510.2-201ENST00000562820 896 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC091178.1-203ENST00000584586 279 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC110743.1-201ENST00000584870 478 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AL354984.3-201ENST00000604803 325 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC8P31273 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC8P31273 AC007546.1-201ENST00000619452 559 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC009269.6-201ENST00000621778 588 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 AC010872.1-201ENST00000624225 675 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 RNF6P1-201ENST00000444889 1784 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 NXPH1-205ENST00000602349 1953 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC8P31273 ASNSP1-201ENST00000518311 1939 ntBASIC4.82□□□□□ -1.64
HOXC8P31273 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXC8P31273 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 RNU1-63P-201ENST00000383902 164 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC097374.1-203ENST00000400783 485 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 TCEA1P4-201ENST00000415066 844 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 RPL23AP38-201ENST00000423801 469 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 CDC27P1-201ENST00000445384 715 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms