Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
TNFSF4P23510 SRRM1P3-201ENST00000426911 2678 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC011477.1-204ENST00000623416 1325 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 OR4F13P-202ENST00000560066 2054 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC092681.1-201ENST00000297369 291 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AL121886.1-201ENST00000358609 435 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 RNA5SP131-201ENST00000365452 119 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 MIR143-201ENST00000385300 106 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 CYCSP45-201ENST00000402289 315 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AL009179.1-201ENST00000406085 265 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC090960.1-201ENST00000421072 306 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 HMGN2P27-201ENST00000427352 270 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 BMS1P19-201ENST00000433925 393 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC006335.2-201ENST00000437993 330 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 MTND2P22-201ENST00000444325 1033 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.78□□□□□ -1.64
TNFSF4P23510 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 RPL7P1-201ENST00000468161 747 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 RPL7P9-201ENST00000468715 747 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 RPL21P103-201ENST00000479921 488 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.78□□□□□ -1.64
TNFSF4P23510 DUTP7-201ENST00000507982 486 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 HSPE1P23-201ENST00000509838 286 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC104986.1-201ENST00000517978 436 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 HSPA8P13-201ENST00000523715 472 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 OR8L1P-201ENST00000534005 955 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AL133457.1-201ENST00000564251 987 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 MRPS21P7-201ENST00000566937 238 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF4P23510 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 RPL23AP92-201ENST00000603609 255 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 FO393422.1-201ENST00000603908 708 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 RNU6-88P-201ENST00000606801 100 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC072039.2-201ENST00000608883 439 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AL354976.1-201ENST00000613843 387 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AL392048.1-201ENST00000613946 534 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC099669.2-201ENST00000616549 437 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 BMS1P21-201ENST00000634565 365 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF4P23510 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC008758.3-201ENST00000507003 1829 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 AC083899.1-201ENST00000454465 3819 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 AC012321.1-201ENST00000561622 1588 ntBASIC4.78□□□□□ -1.64
TNFSF4P23510 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF4P23510 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TNFSF4P23510 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TNFSF4P23510 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 MTCO1P23-201ENST00000415223 1526 ntBASIC4.77□□□□□ -1.65
TNFSF4P23510 ZNF734P-201ENST00000419494 1534 ntBASIC4.77□□□□□ -1.65
TNFSF4P23510 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TNFSF4P23510 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.77□□□□□ -1.65
TNFSF4P23510 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF4P23510 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms