Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 TRIM60P17-201ENST00000415181 719 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC087650.1-201ENST00000431445 468 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC073587.1-201ENST00000447093 876 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AL133162.1-201ENST00000463228 453 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 RPS29P2-201ENST00000479278 136 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 RN7SL293P-201ENST00000481765 281 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 HSPD1P15-201ENST00000505573 1122 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.77□□□□□ -1.81
COL5A1P20908 RPL23AP87-202ENST00000573039 466 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AC068020.1-201ENST00000594215 661 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AC020914.6-201ENST00000594327 272 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL5A1P20908 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC097504.1-201ENST00000515103 2415 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.77□□□□□ -1.81
COL5A1P20908 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC112198.2-201ENST00000426589 6996 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL5A1P20908 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
COL5A1P20908 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.77□□□□□ -1.81
COL5A1P20908 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.77□□□□□ -1.81
COL5A1P20908 AC073530.2-201ENST00000623987 261 ntBASIC3.77□□□□□ -1.81
COL5A1P20908 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL5A1P20908 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL5A1P20908 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL5A1P20908 MAPK10-303ENST00000641324 3959 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 RNA5SP51-201ENST00000364750 119 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 MIR199A2-201ENST00000385289 110 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 ZNF602P-201ENST00000405929 924 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 PGBD4P8-201ENST00000412993 562 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.76□□□□□ -1.81
COL5A1P20908 AL591419.1-201ENST00000427423 339 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 HSPD1P21-201ENST00000436541 245 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.76□□□□□ -1.81
COL5A1P20908 AP000942.1-201ENST00000463969 747 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.76□□□□□ -1.81
COL5A1P20908 CDH12P2-201ENST00000504393 298 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 AC104619.4-201ENST00000510773 249 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.76□□□□□ -1.81
COL5A1P20908 MIR4513-201ENST00000581077 86 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.76□□□□□ -1.81
COL5A1P20908 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 ELOCP35-201ENST00000604289 336 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL5A1P20908 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL5A1P20908 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL5A1P20908 MTCO1P12-201ENST00000414273 1543 ntBASIC3.76□□□□□ -1.81
COL5A1P20908 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.75□□□□□ -1.81
COL5A1P20908 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.75□□□□□ -1.81
COL5A1P20908 MTND6P5-201ENST00000448266 512 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.75□□□□□ -1.81
COL5A1P20908 AC008802.1-201ENST00000519121 791 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.75□□□□□ -1.81
COL5A1P20908 MIR3922-201ENST00000585192 84 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 AC124312.6-202ENST00000623624 418 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 OR6C71P-202ENST00000641886 1107 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.75□□□□□ -1.81
COL5A1P20908 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
COL5A1P20908 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 AC074029.4-201ENST00000624796 1859 ntBASIC3.75□□□□□ -1.81
COL5A1P20908 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL5A1P20908 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.75□□□□□ -1.81
COL5A1P20908 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 MIR128-1-201ENST00000384921 82 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC005726.1-201ENST00000494679 427 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 DEFB109D-201ENST00000529497 240 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms