Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 RPS27AP17-201ENST00000463344 455 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 RPL37P6-202ENST00000464216 403 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC104689.1-201ENST00000473356 768 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC010468.3-201ENST00000508225 458 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC008565.1-201ENST00000509046 885 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 RPL7L1P13-201ENST00000511702 739 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 SNORA76.2-201ENST00000517095 137 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC020634.1-201ENST00000608701 549 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 MIR6891-201ENST00000618788 93 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC007546.2-201ENST00000623996 360 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 ERCC6-202ENST00000374127 1782 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RNA5SP443-201ENST00000363083 132 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 MIR129-1-201ENST00000384972 72 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RNU6-796P-201ENST00000391086 107 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 PRELID3BP11-201ENST00000414230 479 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AL807761.1-201ENST00000417622 171 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RPL7AP25-201ENST00000423357 805 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 CENPIP1-201ENST00000425713 902 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 DNAJC19P7-201ENST00000428811 344 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RPS6P12-201ENST00000432491 726 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC092809.1-201ENST00000441469 474 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 HMGB1P48-201ENST00000446155 598 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RPS27AP15-201ENST00000447672 466 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC005008.1-201ENST00000456151 612 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 MTND2P30-201ENST00000456663 382 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RPS20P21-201ENST00000466859 343 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC018635.1-201ENST00000468292 1030 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AP000926.1-201ENST00000479573 241 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RN7SL459P-201ENST00000481078 302 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AK3P4-201ENST00000504283 583 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC133963.2-201ENST00000513686 578 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 TCP11X3P-202ENST00000514289 1254 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RNA5SP464-201ENST00000516251 108 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 RPL23AP97-201ENST00000568955 471 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC090312.2-201ENST00000582687 378 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AP001160.4-201ENST00000596971 382 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 OR2BH1P-201ENST00000608850 864 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC017007.4-201ENST00000503353 1352 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AL132640.2-201ENST00000559968 1698 ntBASIC4.48□□□□□ -1.69
HLA-DPA1P20036 AC104446.1-201ENST00000613728 1321 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC025125.1-201ENST00000624743 1922 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RAD17P1-201ENST00000418130 2042 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RN7SKP44-201ENST00000363602 316 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RNA5SP27-201ENST00000363839 119 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RN7SKP199-201ENST00000410325 305 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RN7SKP177-201ENST00000410567 355 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 Y_RNA.625-201ENST00000411256 107 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms