Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 AF001550.2-201ENST00000636643 217 ntBASIC4.87□□□□□ -1.63
CD53P19397 AC099654.9-201ENST00000637055 678 ntBASIC4.87□□□□□ -1.63
CD53P19397 AC099654.8-201ENST00000637757 681 ntBASIC4.87□□□□□ -1.63
CD53P19397 MFSD8-245ENST00000641743 948 ntBASIC4.87□□□□□ -1.63
CD53P19397 AC073869.8-201ENST00000641806 335 ntBASIC4.87□□□□□ -1.63
CD53P19397 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.87□□□□□ -1.63
CD53P19397 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.87□□□□□ -1.63
CD53P19397 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CD53P19397 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CD53P19397 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.87□□□□□ -1.63
CD53P19397 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD53P19397 AL157700.1-201ENST00000561973 1432 ntBASIC4.87□□□□□ -1.63
CD53P19397 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 Z99496.1-201ENST00000469424 1477 ntBASIC4.87□□□□□ -1.63
CD53P19397 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.87□□□□□ -1.63
CD53P19397 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD53P19397 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CD53P19397 AC130650.2-201ENST00000618736 2403 ntBASIC4.86□□□□□ -1.63
CD53P19397 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.86□□□□□ -1.63
CD53P19397 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.86□□□□□ -1.63
CD53P19397 RNA5SP189-201ENST00000364920 115 ntBASIC4.86□□□□□ -1.63
CD53P19397 RNU6-224P-201ENST00000384055 107 ntBASIC4.86□□□□□ -1.63
CD53P19397 MIR122-201ENST00000385044 85 ntBASIC4.86□□□□□ -1.63
CD53P19397 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD53P19397 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.86□□□□□ -1.63
CD53P19397 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.86□□□□□ -1.63
CD53P19397 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.86□□□□□ -1.63
CD53P19397 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 AC244098.2-201ENST00000422068 99 ntBASIC4.86□□□□□ -1.63
CD53P19397 MTCO3P1-205ENST00000422088 832 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 CNOT7P1-201ENST00000429006 852 ntBASIC4.86□□□□□ -1.63
CD53P19397 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.86□□□□□ -1.63
CD53P19397 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 AC019185.1-201ENST00000442718 389 ntBASIC4.86□□□□□ -1.63
CD53P19397 FAR2P1-206ENST00000449736 709 ntBASIC4.86□□□□□ -1.63
CD53P19397 AURKAPS1-201ENST00000451805 1212 ntBASIC4.86□□□□□ -1.63
CD53P19397 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.86□□□□□ -1.63
CD53P19397 AC091685.2-201ENST00000454924 864 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 RPL7AP6-201ENST00000477943 801 ntBASIC4.86□□□□□ -1.63
CD53P19397 RPSAP50-201ENST00000481955 852 ntBASIC4.86□□□□□ -1.63
CD53P19397 NCOR1P1-202ENST00000486162 291 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.86□□□□□ -1.63
CD53P19397 GTF2IP9-201ENST00000502460 301 ntBASIC4.86□□□□□ -1.63
CD53P19397 MTCO1P30-201ENST00000515244 580 ntBASIC4.86□□□□□ -1.63
CD53P19397 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.86□□□□□ -1.63
CD53P19397 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.86□□□□□ -1.63
CD53P19397 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.86□□□□□ -1.63
CD53P19397 SULT1C2P1-202ENST00000562418 459 ntBASIC4.86□□□□□ -1.63
CD53P19397 RN7SL339P-201ENST00000580597 296 ntBASIC4.86□□□□□ -1.63
CD53P19397 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 RN7SL708P-201ENST00000580952 299 ntBASIC4.86□□□□□ -1.63
CD53P19397 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 AC068790.7-201ENST00000602347 528 ntBASIC4.86□□□□□ -1.63
CD53P19397 AL022067.1-201ENST00000602426 454 ntBASIC4.86□□□□□ -1.63
CD53P19397 Mico1.1-201ENST00000611698 204 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC090116.1-201ENST00000615679 446 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC090510.2-201ENST00000617465 629 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC008993.2-201ENST00000631744 806 ntBASIC4.86□□□□□ -1.63
CD53P19397 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 A2MP1-204ENST00000566278 4130 ntBASIC4.86□□□□□ -1.63
CD53P19397 AC112198.2-201ENST00000426589 6996 ntBASIC4.86□□□□□ -1.63
CD53P19397 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.86□□□□□ -1.63
CD53P19397 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD53P19397 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD53P19397 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD53P19397 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.85□□□□□ -1.63
CD53P19397 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CD53P19397 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD53P19397 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD53P19397 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD53P19397 RNU6-339P-201ENST00000384310 107 ntBASIC4.85□□□□□ -1.63
CD53P19397 Y_RNA.493-201ENST00000384422 102 ntBASIC4.85□□□□□ -1.63
CD53P19397 MIR550A3-201ENST00000390735 95 ntBASIC4.85□□□□□ -1.63
CD53P19397 RNU6-1300P-201ENST00000391046 108 ntBASIC4.85□□□□□ -1.63
CD53P19397 RPL37P18-201ENST00000411602 243 ntBASIC4.85□□□□□ -1.63
CD53P19397 BOLA3P4-201ENST00000418151 400 ntBASIC4.85□□□□□ -1.63
CD53P19397 RBMY2KP-201ENST00000418221 992 ntBASIC4.85□□□□□ -1.63
CD53P19397 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.85□□□□□ -1.63
CD53P19397 MTCO2P17-201ENST00000424336 677 ntBASIC4.85□□□□□ -1.63
CD53P19397 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.85□□□□□ -1.63
CD53P19397 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms