Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL157884.3-201ENST00000448273 1184 ntBASIC4.81□□□□□ -1.64
TOP1P11387 RPL31P20-201ENST00000449593 360 ntBASIC4.81□□□□□ -1.64
TOP1P11387 FCF1P7-201ENST00000451185 558 ntBASIC4.81□□□□□ -1.64
TOP1P11387 RAD23BP3-201ENST00000454157 1152 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AP000926.3-201ENST00000497201 299 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.81□□□□□ -1.64
TOP1P11387 HNRNPKP5-201ENST00000515300 253 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.81□□□□□ -1.64
TOP1P11387 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.81□□□□□ -1.64
TOP1P11387 OR7E10P-201ENST00000526420 991 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.81□□□□□ -1.64
TOP1P11387 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.81□□□□□ -1.64
TOP1P11387 AC084824.1-201ENST00000550917 1005 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.81□□□□□ -1.64
TOP1P11387 AC027281.1-201ENST00000574178 758 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP1P11387 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.81□□□□□ -1.64
TOP1P11387 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TOP1P11387 BMS1P7-201ENST00000602440 1052 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP1P11387 AC064801.1-201ENST00000612025 407 ntBASIC4.81□□□□□ -1.64
TOP1P11387 NF1P10-201ENST00000613227 742 ntBASIC4.81□□□□□ -1.64
TOP1P11387 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP1P11387 AC009318.3-201ENST00000616916 503 ntBASIC4.81□□□□□ -1.64
TOP1P11387 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
TOP1P11387 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TOP1P11387 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TOP1P11387 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TOP1P11387 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP1P11387 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP1P11387 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TOP1P11387 AC097504.1-201ENST00000515103 2415 ntBASIC4.8□□□□□ -1.64
TOP1P11387 SNORA57.1-201ENST00000391227 145 ntBASIC4.8□□□□□ -1.64
TOP1P11387 HSPE1P12-201ENST00000412576 301 ntBASIC4.8□□□□□ -1.64
TOP1P11387 AL392003.1-201ENST00000434394 243 ntBASIC4.8□□□□□ -1.64
TOP1P11387 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 ELOCP8-201ENST00000439309 332 ntBASIC4.8□□□□□ -1.64
TOP1P11387 ELOCP15-201ENST00000442090 332 ntBASIC4.8□□□□□ -1.64
TOP1P11387 FGF7P3-201ENST00000454645 303 ntBASIC4.8□□□□□ -1.64
TOP1P11387 SEPT14P1-201ENST00000458703 648 ntBASIC4.8□□□□□ -1.64
TOP1P11387 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.8□□□□□ -1.64
TOP1P11387 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 AC017037.1-201ENST00000508460 471 ntBASIC4.8□□□□□ -1.64
TOP1P11387 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP1P11387 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.8□□□□□ -1.64
TOP1P11387 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.8□□□□□ -1.64
TOP1P11387 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.8□□□□□ -1.64
TOP1P11387 OR8R1P-201ENST00000543943 764 ntBASIC4.8□□□□□ -1.64
TOP1P11387 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.8□□□□□ -1.64
TOP1P11387 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 MIR4716-201ENST00000579628 84 ntBASIC4.8□□□□□ -1.64
TOP1P11387 MIR5684-201ENST00000585074 65 ntBASIC4.8□□□□□ -1.64
TOP1P11387 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.8□□□□□ -1.64
TOP1P11387 VN1R85P-201ENST00000601587 426 ntBASIC4.8□□□□□ -1.64
TOP1P11387 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.8□□□□□ -1.64
TOP1P11387 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.8□□□□□ -1.64
TOP1P11387 AP005264.7-201ENST00000625003 745 ntBASIC4.8□□□□□ -1.64
TOP1P11387 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TOP1P11387 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TOP1P11387 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TOP1P11387 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TOP1P11387 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP1P11387 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TOP1P11387 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP1P11387 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP1P11387 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP1P11387 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 CASC19-261ENST00000641853 1638 ntBASIC4.79□□□□□ -1.64
TOP1P11387 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOP1P11387 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TOP1P11387 SNORA60-201ENST00000362396 134 ntBASIC4.79□□□□□ -1.64
TOP1P11387 RNA5SP283-201ENST00000365604 119 ntBASIC4.79□□□□□ -1.64
TOP1P11387 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 AC073069.1-201ENST00000428657 441 ntBASIC4.79□□□□□ -1.64
TOP1P11387 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP1P11387 BTG3P1-201ENST00000435859 716 ntBASIC4.79□□□□□ -1.64
TOP1P11387 AL162151.2-201ENST00000448875 158 ntBASIC4.79□□□□□ -1.64
TOP1P11387 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 FTH1P2-201ENST00000466086 412 ntBASIC4.79□□□□□ -1.64
TOP1P11387 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TOP1P11387 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 KRT19P6-201ENST00000510983 209 ntBASIC4.79□□□□□ -1.64
TOP1P11387 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOP1P11387 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP1P11387 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP1P11387 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TOP1P11387 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 AC007423.1-201ENST00000605009 627 ntBASIC4.79□□□□□ -1.64
TOP1P11387 AC024941.1-201ENST00000612250 334 ntBASIC4.79□□□□□ -1.64
TOP1P11387 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP1P11387 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TOP1P11387 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP1P11387 IQCB2P-201ENST00000401788 1633 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms