Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM1P09493 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM1P09493 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
TPM1P09493 SNORD116-30-201ENST00000516468 85 ntBASIC4.43□□□□□ -1.7
TPM1P09493 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM1P09493 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM1P09493 AC022968.1-201ENST00000567372 442 ntBASIC4.43□□□□□ -1.7
TPM1P09493 AC025627.2-201ENST00000576220 160 ntBASIC4.43□□□□□ -1.7
TPM1P09493 AC068790.7-201ENST00000602347 528 ntBASIC4.43□□□□□ -1.7
TPM1P09493 AC093765.1-201ENST00000603758 881 ntBASIC4.43□□□□□ -1.7
TPM1P09493 MIR6862-1-201ENST00000613016 70 ntBASIC4.43□□□□□ -1.7
TPM1P09493 MIR6862-2-201ENST00000614755 70 ntBASIC4.43□□□□□ -1.7
TPM1P09493 uc_338.9-201ENST00000617424 182 ntBASIC4.43□□□□□ -1.7
TPM1P09493 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TPM1P09493 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TPM1P09493 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM1P09493 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
TPM1P09493 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.43□□□□□ -1.7
TPM1P09493 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TPM1P09493 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM1P09493 AC116667.1-201ENST00000604855 2072 ntBASIC4.42□□□□□ -1.7
TPM1P09493 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM1P09493 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 UBE3AP2-201ENST00000429033 2259 ntBASIC4.42□□□□□ -1.7
TPM1P09493 MIR320B1-201ENST00000390209 79 ntBASIC4.42□□□□□ -1.7
TPM1P09493 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TPM1P09493 AL035419.1-201ENST00000397037 564 ntBASIC4.42□□□□□ -1.7
TPM1P09493 RN7SKP182-201ENST00000410772 298 ntBASIC4.42□□□□□ -1.7
TPM1P09493 NRBF2P2-201ENST00000413087 861 ntBASIC4.42□□□□□ -1.7
TPM1P09493 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM1P09493 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM1P09493 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM1P09493 AC006011.1-201ENST00000442758 349 ntBASIC4.42□□□□□ -1.7
TPM1P09493 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM1P09493 MTCO3P16-201ENST00000454456 754 ntBASIC4.42□□□□□ -1.7
TPM1P09493 DNAJC19P1-201ENST00000455312 319 ntBASIC4.42□□□□□ -1.7
TPM1P09493 RPS27AP16-201ENST00000492222 470 ntBASIC4.42□□□□□ -1.7
TPM1P09493 RPS4XP14-201ENST00000493072 781 ntBASIC4.42□□□□□ -1.7
TPM1P09493 KATNBL1P4-201ENST00000503545 918 ntBASIC4.42□□□□□ -1.7
TPM1P09493 AC093824.1-201ENST00000508796 343 ntBASIC4.42□□□□□ -1.7
TPM1P09493 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM1P09493 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM1P09493 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM1P09493 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
TPM1P09493 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM1P09493 RPL12P25-202ENST00000598100 674 ntBASIC4.42□□□□□ -1.7
TPM1P09493 AC083899.3-201ENST00000603413 594 ntBASIC4.42□□□□□ -1.7
TPM1P09493 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 AC091953.3-201ENST00000623220 236 ntBASIC4.42□□□□□ -1.7
TPM1P09493 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
TPM1P09493 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TPM1P09493 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM1P09493 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TPM1P09493 AC007685.1-201ENST00000329806 452 ntBASIC4.41□□□□□ -1.7
TPM1P09493 SNORA62.2-201ENST00000364672 152 ntBASIC4.41□□□□□ -1.7
TPM1P09493 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM1P09493 SNORD65-201ENST00000391079 73 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.41□□□□□ -1.7
TPM1P09493 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 RPL30P3-201ENST00000424262 333 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 AC092691.2-201ENST00000461787 803 ntBASIC4.41□□□□□ -1.7
TPM1P09493 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM1P09493 AL133372.1-201ENST00000493565 745 ntBASIC4.41□□□□□ -1.7
TPM1P09493 RN7SL691P-201ENST00000494487 301 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AC105233.1-201ENST00000498840 781 ntBASIC4.41□□□□□ -1.7
TPM1P09493 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 AC021146.1-201ENST00000511202 716 ntBASIC4.41□□□□□ -1.7
TPM1P09493 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
TPM1P09493 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 TOMM20P2-201ENST00000540082 421 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AL161713.1-201ENST00000555538 145 ntBASIC4.41□□□□□ -1.7
TPM1P09493 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 Z82195.1-201ENST00000604558 398 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AC114878.2-201ENST00000604863 1251 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AC124312.6-202ENST00000623624 418 ntBASIC4.41□□□□□ -1.7
TPM1P09493 AL139254.3-201ENST00000641097 674 ntBASIC4.41□□□□□ -1.7
TPM1P09493 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM1P09493 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TPM1P09493 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM1P09493 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM1P09493 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM1P09493 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
TPM1P09493 TNPO1P3-201ENST00000436471 2662 ntBASIC4.4□□□□□ -1.7
TPM1P09493 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.7
TPM1P09493 MTCO1P14-201ENST00000441695 1559 ntBASIC4.4□□□□□ -1.7
TPM1P09493 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TPM1P09493 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TPM1P09493 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TPM1P09493 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TPM1P09493 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.4□□□□□ -1.7
TPM1P09493 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms