Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC108941.1-201ENST00000502853 530 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A1P02462 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A1P02462 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A1P02462 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A1P02462 AC092354.2-201ENST00000607786 514 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 OR7M1P-201ENST00000608946 533 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 U4.6-201ENST00000621618 127 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 OR5AC4P-202ENST00000642086 985 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 ZNF833P-201ENST00000424938 1494 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 AL391219.1-201ENST00000422570 483 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 AC087650.1-201ENST00000431445 468 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A1P02462 CYCSP32-201ENST00000440548 321 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 RPL26P28-201ENST00000451325 435 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 SNORA59A-201ENST00000459326 152 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
COL4A1P02462 TRAV15-201ENST00000556680 249 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AL354976.1-201ENST00000613843 387 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AL139089.1-201ENST00000620372 975 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A1P02462 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A1P02462 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL4A1P02462 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL4A1P02462 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL4A1P02462 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A1P02462 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A1P02462 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL4A1P02462 RNA5SP424-201ENST00000390988 115 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A1P02462 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 ELOCP8-201ENST00000439309 332 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 ELOCP15-201ENST00000442090 332 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 Z75741.1-201ENST00000446793 314 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 RN7SL601P-201ENST00000471221 293 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 TRBV12-2-201ENST00000489763 344 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A1P02462 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A1P02462 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AC093524.1-201ENST00000564266 1094 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AC106782.4-201ENST00000568264 210 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A1P02462 AL365440.1-201ENST00000436135 2167 ntBASIC4.48□□□□□ -1.69
COL4A1P02462 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A1P02462 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A1P02462 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A1P02462 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.47□□□□□ -1.69
COL4A1P02462 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.47□□□□□ -1.69
COL4A1P02462 RN7SKP74-201ENST00000362849 309 ntBASIC4.47□□□□□ -1.69
COL4A1P02462 Z92545.1-201ENST00000411782 234 ntBASIC4.47□□□□□ -1.69
COL4A1P02462 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A1P02462 SNORA70.24-201ENST00000517233 118 ntBASIC4.47□□□□□ -1.69
COL4A1P02462 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 AC103843.2-201ENST00000530523 682 ntBASIC4.47□□□□□ -1.69
COL4A1P02462 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.47□□□□□ -1.69
COL4A1P02462 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A1P02462 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A1P02462 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 OR51C1P-202ENST00000641159 1444 ntBASIC4.46□□□□□ -1.7
COL4A1P02462 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 HMGB3P20-201ENST00000417997 600 ntBASIC4.46□□□□□ -1.7
COL4A1P02462 AL158156.1-201ENST00000422509 473 ntBASIC4.46□□□□□ -1.7
COL4A1P02462 SNORA70.17-201ENST00000516449 133 ntBASIC4.46□□□□□ -1.7
COL4A1P02462 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A1P02462 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A1P02462 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A1P02462 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.46□□□□□ -1.7
COL4A1P02462 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A1P02462 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.46□□□□□ -1.7
COL4A1P02462 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL4A1P02462 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A1P02462 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.46□□□□□ -1.7
COL4A1P02462 AL442128.2-201ENST00000620246 1824 ntBASIC4.46□□□□□ -1.7
COL4A1P02462 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.46□□□□□ -1.7
COL4A1P02462 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL4A1P02462 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL4A1P02462 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 RNU1-108P-201ENST00000362556 161 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 RNA5SP197-201ENST00000363357 119 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 RN7SKP199-201ENST00000410325 305 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A1P02462 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms