Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC004801.2-202ENST00000463559 283 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 RNU7-143P-201ENST00000516781 65 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 RNU6-1231P-201ENST00000517185 103 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.18□□□□□ -1.9
IFNA1P01562 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.18□□□□□ -1.9
IFNA1P01562 OR7E10P-201ENST00000526420 991 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC008033.2-201ENST00000542626 177 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 HAUS8P1-201ENST00000549005 542 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.18□□□□□ -1.9
IFNA1P01562 OR4U1P-201ENST00000554958 912 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 AC022146.1-201ENST00000595307 847 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 LLPHP1-201ENST00000603571 367 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 BRDTP1-201ENST00000605735 677 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC006946.3-201ENST00000609791 756 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC004808.2-201ENST00000627965 773 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC008013.2-202ENST00000637965 364 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 RNF6P1-201ENST00000444889 1784 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
IFNA1P01562 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 AC107977.1-201ENST00000355745 939 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 RNA5SP191-201ENST00000362585 102 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 RNU1-106P-201ENST00000384382 164 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC240504.1-201ENST00000395709 845 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 HMGB1P10-201ENST00000395823 563 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 CCNB2P1-201ENST00000399411 1150 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 HSPE1P26-201ENST00000405341 275 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 RN7SKP285-201ENST00000410137 318 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 RN7SKP100-201ENST00000411258 284 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 AL049610.1-201ENST00000423374 372 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.17□□□□□ -1.9
IFNA1P01562 UBE2V2P1-201ENST00000434717 398 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.17□□□□□ -1.9
IFNA1P01562 MTCYBP21-201ENST00000443300 1113 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC018638.3-201ENST00000461273 132 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC063943.1-201ENST00000465434 453 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 RPL23AP14-201ENST00000468281 468 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 COPS8P2-201ENST00000473228 627 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 BX284632.1-201ENST00000478218 541 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 RPL21P103-201ENST00000479921 488 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC090568.1-201ENST00000509499 856 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.17□□□□□ -1.9
IFNA1P01562 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.17□□□□□ -1.9
IFNA1P01562 RN7SKP82-201ENST00000516786 223 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 AP000827.1-201ENST00000527814 258 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC022968.1-201ENST00000567372 442 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 MIR3934-201ENST00000579806 107 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.17□□□□□ -1.9
IFNA1P01562 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.17□□□□□ -1.9
IFNA1P01562 AL354984.3-201ENST00000604803 325 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC016252.1-201ENST00000609721 474 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 MIR8058-201ENST00000615737 89 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AL139089.1-201ENST00000620372 975 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AP002799.1-201ENST00000623552 423 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 AC092159.4-201ENST00000624944 550 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 OR6C71P-202ENST00000641886 1107 ntBASIC3.17□□□□□ -1.9
IFNA1P01562 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
IFNA1P01562 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFNA1P01562 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
IFNA1P01562 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
IFNA1P01562 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IFNA1P01562 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFNA1P01562 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFNA1P01562 Y_RNA.62-201ENST00000362840 99 ntBASIC3.16□□□□□ -1.9
IFNA1P01562 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
IFNA1P01562 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.16□□□□□ -1.9
IFNA1P01562 MIR659-201ENST00000384963 97 ntBASIC3.16□□□□□ -1.9
IFNA1P01562 U3.25-201ENST00000391209 220 ntBASIC3.16□□□□□ -1.9
IFNA1P01562 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.16□□□□□ -1.9
IFNA1P01562 MTHFD2P2-201ENST00000407725 247 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms