Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNA5SP428-201ENST00000365129 132 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
CLPTM1O96005 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL035458.1-201ENST00000433096 585 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 ELOCP8-201ENST00000439309 332 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 ARF4P4-201ENST00000439608 520 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 RPL12P3-201ENST00000440080 396 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 ELOCP15-201ENST00000442090 332 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.32□□□□□ -1.72
CLPTM1O96005 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RPL7P31-201ENST00000450192 724 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RN7SL610P-201ENST00000463845 291 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RN7SL97P-201ENST00000486780 299 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 RPS27AP16-201ENST00000492222 470 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RNA5SP43-201ENST00000516559 110 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 MIR4789-201ENST00000577469 82 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 BNIP3P38-201ENST00000601117 544 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC093673.2-201ENST00000609674 331 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC140725.3-201ENST00000616193 880 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC004825.2-201ENST00000616634 455 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AC011815.3-201ENST00000624194 473 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.32□□□□□ -1.72
CLPTM1O96005 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CLPTM1O96005 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLPTM1O96005 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLPTM1O96005 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLPTM1O96005 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLPTM1O96005 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 CASC19-284ENST00000642142 1868 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLPTM1O96005 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL357515.1-201ENST00000402967 542 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AL078604.1-201ENST00000404609 466 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 UBE2V1P11-201ENST00000411559 285 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL391219.1-201ENST00000422570 483 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AL590762.4-201ENST00000425885 253 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 MTCYBP15-201ENST00000433123 1127 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC000041.1-201ENST00000439655 175 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 TPTE2P3-201ENST00000441562 1189 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 MTCO1P53-201ENST00000441633 699 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL133477.1-201ENST00000457472 514 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 METTL15P1-201ENST00000481421 1045 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 Y_RNA.717-201ENST00000517106 92 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AP001207.2-201ENST00000519490 539 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC135001.1-201ENST00000544546 283 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AP003717.3-201ENST00000544832 1180 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms