Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.33□□□□□ -1.56
CNOT4O95628 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.33□□□□□ -1.56
CNOT4O95628 ANP32BP3-201ENST00000559213 706 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.33□□□□□ -1.56
CNOT4O95628 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.33□□□□□ -1.56
CNOT4O95628 AC009101.1-201ENST00000568135 242 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.33□□□□□ -1.56
CNOT4O95628 AP005119.1-201ENST00000580956 292 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.33□□□□□ -1.56
CNOT4O95628 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.33□□□□□ -1.56
CNOT4O95628 AC078795.3-201ENST00000602913 472 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC009994.1-201ENST00000606889 253 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.33□□□□□ -1.56
CNOT4O95628 AC007038.2-201ENST00000608095 740 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AL121757.2-201ENST00000611223 313 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC091834.1-201ENST00000614543 472 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC123768.4-201ENST00000616244 701 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AC104260.1-201ENST00000616660 539 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 MIR6826-201ENST00000617808 98 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 AP005264.7-201ENST00000625003 745 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 LRRC77P-213ENST00000637727 880 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.33□□□□□ -1.56
CNOT4O95628 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CNOT4O95628 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNOT4O95628 AC022031.1-201ENST00000585985 2593 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CNOT4O95628 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNOT4O95628 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNOT4O95628 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNOT4O95628 OR9K1P-202ENST00000641111 3217 ntBASIC5.33□□□□□ -1.56
CNOT4O95628 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNOT4O95628 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 AP002001.2-201ENST00000529025 1469 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 RPS4XP5-202ENST00000449995 1334 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 AC008033.1-201ENST00000216407 1162 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CNOT4O95628 RNA5SP477-201ENST00000362639 119 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 AC019155.1-201ENST00000382242 574 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC007066.1-201ENST00000392902 381 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 AL133482.1-201ENST00000415988 498 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 BX284632.2-201ENST00000421091 399 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC016027.5-201ENST00000427227 210 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.32□□□□□ -1.56
CNOT4O95628 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 MTCO2P11-201ENST00000431069 680 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 FMO7P-201ENST00000436045 768 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 UBE2FP3-201ENST00000436366 524 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 COX6CP18-201ENST00000448769 222 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 GEMIN2P1-201ENST00000454246 752 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC112187.1-201ENST00000455837 479 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.32□□□□□ -1.56
CNOT4O95628 ARPC3P2-201ENST00000457786 533 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AL122020.1-201ENST00000472287 459 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC090013.1-201ENST00000485147 480 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 UBA52P3-201ENST00000491303 382 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC008945.1-201ENST00000505144 499 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC098799.3-201ENST00000506095 438 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.32□□□□□ -1.56
CNOT4O95628 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 IGKV2-19-201ENST00000518132 283 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 AP000648.1-201ENST00000529682 397 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC090022.1-201ENST00000546569 311 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC068446.3-201ENST00000555285 382 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC090312.1-201ENST00000580637 348 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC020914.6-201ENST00000594327 272 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC098614.4-201ENST00000607601 462 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AC007497.1-201ENST00000610421 561 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 AC073348.1-201ENST00000623002 331 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 FAM157B-203ENST00000639350 358 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.32□□□□□ -1.56
CNOT4O95628 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 MAPK10-304ENST00000641341 3984 ntBASIC5.32□□□□□ -1.56
CNOT4O95628 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CNOT4O95628 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNOT4O95628 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms