Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 AC007064.3-201ENST00000422608 359 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC093084.1-201ENST00000424233 687 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AL157831.1-201ENST00000426134 473 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AL360081.1-201ENST00000428299 555 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.05□□□□□ -1.76
SHOX2O60902 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.05□□□□□ -1.76
SHOX2O60902 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.05□□□□□ -1.76
SHOX2O60902 RPL23AP14-201ENST00000468281 468 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC092324.1-201ENST00000468671 324 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.05□□□□□ -1.76
SHOX2O60902 HAUS1P1-201ENST00000505275 832 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.05□□□□□ -1.76
SHOX2O60902 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.05□□□□□ -1.76
SHOX2O60902 MIR4738-201ENST00000579134 87 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC012417.1-201ENST00000582307 1039 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 MIR4737-201ENST00000583979 81 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC008745.1-201ENST00000604064 271 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AL109618.2-201ENST00000605527 211 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC025175.1-201ENST00000606482 759 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.05□□□□□ -1.76
SHOX2O60902 AC092653.1-201ENST00000608509 531 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC091905.1-201ENST00000624400 311 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 OR6C71P-202ENST00000641886 1107 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 AC110792.3-201ENST00000595906 1614 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SHOX2O60902 SDAD1P1-202ENST00000524156 2051 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHOX2O60902 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHOX2O60902 AP000756.2-201ENST00000624168 2567 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC011155.1-201ENST00000316512 456 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHOX2O60902 LINC01881-201ENST00000416103 412 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AL158073.1-201ENST00000426848 1104 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 DNAJC19P7-201ENST00000428811 344 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 KCTD10P1-201ENST00000434203 625 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 MTND2P2-201ENST00000434633 945 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 RPS20P1-201ENST00000434853 354 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SHOX2O60902 CASP3P1-201ENST00000446037 609 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.04□□□□□ -1.76
SHOX2O60902 AC011005.3-201ENST00000491624 395 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC105233.1-201ENST00000498840 781 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.04□□□□□ -1.76
SHOX2O60902 KRT19P6-201ENST00000510983 209 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 IGHV3-32-201ENST00000519182 355 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SHOX2O60902 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.04□□□□□ -1.76
SHOX2O60902 MIR4425-201ENST00000580572 84 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 AC243756.2-201ENST00000618406 463 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.04□□□□□ -1.76
SHOX2O60902 MIR6715B-201ENST00000637172 77 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHOX2O60902 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.04□□□□□ -1.76
SHOX2O60902 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
SHOX2O60902 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHOX2O60902 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHOX2O60902 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHOX2O60902 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHOX2O60902 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHOX2O60902 MIR365B-201ENST00000362317 111 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.03□□□□□ -1.76
SHOX2O60902 AL049697.2-201ENST00000403708 294 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.03□□□□□ -1.76
SHOX2O60902 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.03□□□□□ -1.76
SHOX2O60902 RPL7AP25-201ENST00000423357 805 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 AL451062.2-201ENST00000427515 271 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.03□□□□□ -1.76
SHOX2O60902 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.03□□□□□ -1.76
SHOX2O60902 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHOX2O60902 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 AL512326.1-201ENST00000443050 721 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.03□□□□□ -1.76
SHOX2O60902 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.03□□□□□ -1.76
SHOX2O60902 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 RPL21P71-201ENST00000465598 459 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 RN7SL354P-201ENST00000469282 294 ntBASIC4.03□□□□□ -1.76
SHOX2O60902 RN7SL459P-201ENST00000481078 302 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms