Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 P2RY10P2-201ENST00000416730 913 ntBASIC3.72□□□□□ -1.81
SGCEO43556 MFSD13B-201ENST00000420133 1290 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AL157831.1-201ENST00000426134 473 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AC017083.1-201ENST00000428093 483 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.72□□□□□ -1.81
SGCEO43556 RPS3AP54-201ENST00000435535 734 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.72□□□□□ -1.81
SGCEO43556 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.72□□□□□ -1.81
SGCEO43556 VN1R48P-201ENST00000448149 1036 ntBASIC3.72□□□□□ -1.81
SGCEO43556 C1DP3-201ENST00000455013 423 ntBASIC3.72□□□□□ -1.81
SGCEO43556 RPS29P19-201ENST00000479709 171 ntBASIC3.72□□□□□ -1.81
SGCEO43556 RPL35P6-201ENST00000490024 372 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AP000926.3-201ENST00000497201 299 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AC023050.1-201ENST00000498198 304 ntBASIC3.72□□□□□ -1.81
SGCEO43556 PARP4P3-201ENST00000510265 317 ntBASIC3.72□□□□□ -1.81
SGCEO43556 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.72□□□□□ -1.81
SGCEO43556 SNORA70.14-201ENST00000516205 110 ntBASIC3.72□□□□□ -1.81
SGCEO43556 RNA5SP73-201ENST00000516744 108 ntBASIC3.72□□□□□ -1.81
SGCEO43556 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.72□□□□□ -1.81
SGCEO43556 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.72□□□□□ -1.81
SGCEO43556 OR5M7P-201ENST00000526140 972 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AC068831.4-201ENST00000556118 109 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AL356218.2-201ENST00000605264 187 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AL034351.1-201ENST00000605288 668 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AL031666.3-201ENST00000609320 1006 ntBASIC3.72□□□□□ -1.81
SGCEO43556 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.72□□□□□ -1.81
SGCEO43556 MIR7702-201ENST00000621931 59 ntBASIC3.72□□□□□ -1.81
SGCEO43556 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.72□□□□□ -1.81
SGCEO43556 AL158163.1-201ENST00000603915 1649 ntBASIC3.72□□□□□ -1.81
SGCEO43556 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
SGCEO43556 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SGCEO43556 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.72□□□□□ -1.81
SGCEO43556 AC100871.1-201ENST00000507871 1456 ntBASIC3.72□□□□□ -1.81
SGCEO43556 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SGCEO43556 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.72□□□□□ -1.81
SGCEO43556 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SGCEO43556 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.71□□□□□ -1.81
SGCEO43556 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SGCEO43556 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SGCEO43556 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.71□□□□□ -1.82
SGCEO43556 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SGCEO43556 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SGCEO43556 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SGCEO43556 OR4K17-201ENST00000315543 1032 ntBASIC3.71□□□□□ -1.82
SGCEO43556 RNU1-14P-201ENST00000362759 152 ntBASIC3.71□□□□□ -1.82
SGCEO43556 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.71□□□□□ -1.82
SGCEO43556 AL607077.1-201ENST00000401718 499 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AL035696.2-201ENST00000407941 709 ntBASIC3.71□□□□□ -1.82
SGCEO43556 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.71□□□□□ -1.82
SGCEO43556 RNA5SP498-201ENST00000411342 120 ntBASIC3.71□□□□□ -1.82
SGCEO43556 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC013404.1-201ENST00000413068 249 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC011933.1-201ENST00000413334 321 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.71□□□□□ -1.82
SGCEO43556 HMGB3P22-202ENST00000451823 572 ntBASIC3.71□□□□□ -1.82
SGCEO43556 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 AC116533.1-201ENST00000459748 321 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC006511.1-201ENST00000470614 315 ntBASIC3.71□□□□□ -1.82
SGCEO43556 BNIP3P41-201ENST00000503774 571 ntBASIC3.71□□□□□ -1.82
SGCEO43556 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.71□□□□□ -1.82
SGCEO43556 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SGCEO43556 AC093840.1-201ENST00000511599 336 ntBASIC3.71□□□□□ -1.82
SGCEO43556 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.71□□□□□ -1.82
SGCEO43556 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.71□□□□□ -1.82
SGCEO43556 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.71□□□□□ -1.82
SGCEO43556 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.71□□□□□ -1.82
SGCEO43556 AC027176.2-201ENST00000559166 746 ntBASIC3.71□□□□□ -1.82
SGCEO43556 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.71□□□□□ -1.82
SGCEO43556 MIR5096-201ENST00000583713 70 ntBASIC3.71□□□□□ -1.82
SGCEO43556 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 MIR432-201ENST00000606207 94 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC243654.2-201ENST00000612843 443 ntBASIC3.71□□□□□ -1.82
SGCEO43556 NF1P10-201ENST00000613227 742 ntBASIC3.71□□□□□ -1.82
SGCEO43556 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 AL445363.3-201ENST00000623080 671 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AC138907.10-201ENST00000623708 983 ntBASIC3.71□□□□□ -1.82
SGCEO43556 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.71□□□□□ -1.82
SGCEO43556 AC008013.2-202ENST00000637965 364 ntBASIC3.71□□□□□ -1.82
SGCEO43556 AL139254.3-201ENST00000641097 674 ntBASIC3.71□□□□□ -1.82
SGCEO43556 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SGCEO43556 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SGCEO43556 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SGCEO43556 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
SGCEO43556 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.7□□□□□ -1.82
SGCEO43556 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
SGCEO43556 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.7□□□□□ -1.82
SGCEO43556 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
SGCEO43556 RN7SKP235-201ENST00000410662 305 ntBASIC3.7□□□□□ -1.82
SGCEO43556 RNA5SP306-201ENST00000411087 107 ntBASIC3.7□□□□□ -1.82
SGCEO43556 NRBF2P2-201ENST00000413087 861 ntBASIC3.7□□□□□ -1.82
SGCEO43556 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.7□□□□□ -1.82
SGCEO43556 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms