Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MIR548Y-201ENST00000582739 110 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AC092653.1-201ENST00000608509 531 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AL031666.3-201ENST00000609320 1006 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 AC009032.1-201ENST00000617574 431 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 AC015726.3-201ENST00000624501 418 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 AC093311.1-201ENST00000506586 2021 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 AC074029.4-201ENST00000624796 1859 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLDN3O15551 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 AC092162.3-201ENST00000624511 1624 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 RNU6-185P-201ENST00000384421 107 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AL022722.2-201ENST00000402519 180 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN3O15551 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 AC073069.1-201ENST00000428657 441 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 MRPL50P1-201ENST00000431951 384 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN3O15551 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN3O15551 RPL23AP89-201ENST00000439324 255 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 AC114755.5-201ENST00000447760 831 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AL162388.1-201ENST00000450912 352 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC092691.2-201ENST00000461787 803 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 RPS7P7-201ENST00000463499 571 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC103987.1-201ENST00000473394 348 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC107398.1-201ENST00000486904 505 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC093267.1-201ENST00000489176 961 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN3O15551 SNORA48.9-201ENST00000516419 162 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN3O15551 AC063950.1-201ENST00000552036 308 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN3O15551 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLDN3O15551 AC124068.1-201ENST00000563131 678 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN3O15551 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN3O15551 MTCO3P22-201ENST00000603219 784 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC007423.1-201ENST00000605009 627 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AL591034.3-201ENST00000605511 685 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC009318.3-201ENST00000616916 503 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 AC010608.2-201ENST00000624830 470 ntBASIC4.55□□□□□ -1.68
CLDN3O15551 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN3O15551 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN3O15551 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 IPMKP1-201ENST00000425988 855 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 EIF2S2P3-201ENST00000428356 999 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AC004975.1-201ENST00000428733 208 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 RPS27AP12-201ENST00000429552 465 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AL031663.1-201ENST00000437445 219 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 ELOCP3-201ENST00000439303 348 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC006511.1-201ENST00000470614 315 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 RN7SL604P-201ENST00000492589 296 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.54□□□□□ -1.68
CLDN3O15551 NDUFB4P12-201ENST00000513465 390 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 MTCO1P35-201ENST00000515270 228 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 IFITM8P-201ENST00000522529 394 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.54□□□□□ -1.68
CLDN3O15551 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN3O15551 AL731566.2-201ENST00000618971 317 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 MIR7702-201ENST00000621931 59 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 AC138907.10-201ENST00000623708 983 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN3O15551 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 DDX6P1-205ENST00000441966 1436 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CLDN3O15551 MFSD8-220ENST00000641243 1422 ntBASIC4.54□□□□□ -1.68
CLDN3O15551 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN3O15551 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN3O15551 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN3O15551 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms