Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RN7SKP123-201ENST00000410732 291 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL31P2-201ENST00000413849 377 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC245291.1-201ENST00000419501 328 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093155.2-201ENST00000420734 937 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 GOT2P5-201ENST00000433995 546 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 KCTD9P3-201ENST00000434597 1169 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 COX6CP2-201ENST00000444980 225 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC098824.1-201ENST00000453565 980 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 HMGN2P16-201ENST00000456802 261 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 OR2A1-AS1-202ENST00000467944 422 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL35AP19-201ENST00000469425 329 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 TRBV8-1-201ENST00000481590 279 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC140172.1-201ENST00000502928 141 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 ATG10-AS1-201ENST00000504846 648 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC026826.3-201ENST00000561747 158 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010928.3-201ENST00000587712 541 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC018754.1-201ENST00000607486 925 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC090246.1-201ENST00000616499 426 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 5S_rRNA.29-201ENST00000641250 107 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004972.1-201ENST00000623934 2209 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AL136164.4-201ENST00000625013 2135 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 SNORA37-201ENST00000384504 129 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR551B-201ENST00000384984 96 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 SAR1AP2-201ENST00000392696 594 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 SKINT1L-201ENST00000401057 817 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC126124.2-201ENST00000413542 321 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 BMS1P22-201ENST00000414726 313 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL139095.3-201ENST00000419672 1203 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093084.1-201ENST00000424233 687 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL158071.1-201ENST00000430315 461 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC097523.2-201ENST00000435551 652 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 YWHAZP7-201ENST00000436906 631 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 HMGN2P20-201ENST00000437531 273 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL353898.1-201ENST00000444055 238 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 PPIAP3-201ENST00000450588 505 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC092647.2-201ENST00000452998 253 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL31P13-201ENST00000484151 370 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093267.1-201ENST00000489176 961 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SL547P-201ENST00000490793 290 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093663.1-201ENST00000497190 394 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC110768.1-201ENST00000509222 400 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 FABP5P12-201ENST00000515543 389 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP282-201ENST00000516824 299 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL109766.1-201ENST00000555080 552 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL23AP87-202ENST00000573039 466 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms