Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL354984.3-201ENST00000604803 325 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 HMGB1P50-201ENST00000605814 607 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC015908.5-201ENST00000623289 343 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 RLIMP1-201ENST00000339626 1680 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL356489.2-201ENST00000566968 3528 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL627171.1-201ENST00000618845 1308 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 CASC19-261ENST00000641853 1638 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR200C-201ENST00000384980 68 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR1179-201ENST00000408703 91 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPS23P10-201ENST00000416185 486 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL389915.1-201ENST00000422463 466 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC106901.1-201ENST00000425086 698 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR52Y1P-201ENST00000452418 828 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPL7P22-201ENST00000466005 733 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC112184.1-201ENST00000505179 312 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 HPRT1P2-201ENST00000505250 544 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 IGHV3-63-201ENST00000518422 341 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR5M7P-201ENST00000526140 972 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC006064.5-201ENST00000541782 248 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC107016.1-201ENST00000550463 337 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC005255.1-201ENST00000593748 216 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC008739.3-201ENST00000603262 127 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR432-201ENST00000606207 94 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 Z98200.1-201ENST00000607298 470 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC007546.1-201ENST00000619452 559 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR8B1P-202ENST00000641132 1178 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC006042.3-201ENST00000454684 1469 ntBASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.04□□□□□ -1.76
TMX2-CTNND1H3BSU7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC074029.4-201ENST00000624796 1859 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR11H4-201ENST00000315409 1082 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR23A-201ENST00000385245 73 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 CYCSP19-201ENST00000411715 316 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 UBTFL3-201ENST00000418934 1024 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL451062.2-201ENST00000427515 271 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 MTND6P5-201ENST00000448266 512 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 FCF1P7-201ENST00000451185 558 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 RN7SL542P-201ENST00000467147 294 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC105918.1-201ENST00000474399 838 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 UBTFL6-201ENST00000477929 1024 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC147055.1-201ENST00000509261 750 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNU1-45P-201ENST00000517191 141 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 BNIP3P7-201ENST00000605641 516 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR6075-201ENST00000620782 95 ntBASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMX2-CTNND1H3BSU7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TMX2-CTNND1H3BSU7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms