Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 HLA-N-201ENST00000437516 135 ntBASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 AC084759.1-201ENST00000561168 290 ntBASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 AL137843.1-201ENST00000605078 385 ntBASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 AL513477.2-201ENST00000607858 568 ntBASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK2Q9UPX8 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 RPS7P15-201ENST00000415804 584 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 CYCSP4-201ENST00000429682 331 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC011742.1-201ENST00000431448 434 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AL591363.1-201ENST00000450091 483 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC084198.1-201ENST00000477747 402 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC005726.1-201ENST00000494679 427 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 PPBPP1-201ENST00000510807 373 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 RAC1P2-201ENST00000511164 579 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 AC243654.2-201ENST00000612843 443 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK2Q9UPX8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 RNA5SP51-201ENST00000364750 119 ntBASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 MIR128-1-201ENST00000384921 82 ntBASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 SNORA3.3-201ENST00000408712 125 ntBASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 MIR1289-1-201ENST00000408836 144 ntBASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 AC017037.1-201ENST00000508460 471 ntBASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.75□□□□□ -1.49
SHANK2Q9UPX8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 MTND2P15-201ENST00000418575 892 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 UBDP1-202ENST00000457888 382 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 MTND6P6-201ENST00000478031 263 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AC069240.1-201ENST00000548774 375 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AC020914.6-201ENST00000594327 272 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AC244505.7-201ENST00000599675 272 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AC079880.2-201ENST00000603790 1213 ntBASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.74□□□□□ -1.49
SHANK2Q9UPX8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 SNORD3H-201ENST00000384486 214 ntBASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 RPS3AP46-201ENST00000448352 682 ntBASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 AC097504.1-201ENST00000515103 2415 ntBASIC5.73□□□□□ -1.49
SHANK2Q9UPX8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 RNU1-108P-201ENST00000362556 161 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 VN1R51P-201ENST00000411675 945 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AL391219.1-201ENST00000422570 483 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 REREP1Y-201ENST00000422655 198 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 REREP2Y-201ENST00000439103 200 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms