Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
APOBEC3BQ9UH17 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
APOBEC3BQ9UH17 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
APOBEC3BQ9UH17 AC092435.4-201ENST00000623012 4159 ntBASIC4.17□□□□□ -1.74
APOBEC3BQ9UH17 MTND4P26-201ENST00000415971 1359 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC007390.2-201ENST00000606229 3803 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP130-201ENST00000364431 114 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 SNORA27.3-201ENST00000364937 134 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP283-201ENST00000365604 119 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-883P-201ENST00000384597 107 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL445189.1-201ENST00000405722 338 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 CEACAMP8-201ENST00000413902 580 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC004448.2-201ENST00000422360 586 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 MTATP6P11-201ENST00000428071 670 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL117339.2-201ENST00000430475 180 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 MTND4LP7-201ENST00000431728 294 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 CDC27P1-201ENST00000445384 715 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RPS15AP29-201ENST00000445539 400 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-491P-201ENST00000516099 110 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC109635.6-201ENST00000525487 1113 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC005034.4-201ENST00000603612 899 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC099676.1-201ENST00000608886 657 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC026368.1-201ENST00000614934 690 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC010608.2-201ENST00000624830 470 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 IQCB2P-201ENST00000401788 1633 ntBASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.16□□□□□ -1.74
APOBEC3BQ9UH17 AC010329.2-201ENST00000595195 2737 ntBASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.15□□□□□ -1.74
APOBEC3BQ9UH17 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 RNA5SP22-201ENST00000365393 109 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 RNA5SP105-201ENST00000391123 113 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 RPL21P65-201ENST00000406094 466 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 ARL5AP3-201ENST00000439327 386 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AL359073.1-201ENST00000448036 403 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AL162151.2-201ENST00000448875 158 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC037198.2-201ENST00000478845 733 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 RPS29P19-201ENST00000479709 171 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AF213884.1-201ENST00000488102 463 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 AC008013.2-202ENST00000637965 364 ntBASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
APOBEC3BQ9UH17 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
APOBEC3BQ9UH17 RN7SKP280-201ENST00000364196 304 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms