Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIMD1Q9UGP4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
LIMD1Q9UGP4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIMD1Q9UGP4 AL512329.1-201ENST00000404600 1592 ntBASIC7.12□□□□□ -1.27
LIMD1Q9UGP4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC7.12□□□□□ -1.27
LIMD1Q9UGP4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 RBPJP2-201ENST00000618187 1444 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC011155.1-201ENST00000316512 456 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 Y_RNA.28-201ENST00000362554 111 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 Y_RNA.339-201ENST00000365325 102 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 RNU6-331P-201ENST00000384724 107 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC244452.1-201ENST00000413798 141 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC110602.1-201ENST00000437414 318 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AL138799.3-201ENST00000438968 350 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 SNRPBP1-201ENST00000443634 282 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 PPIAP20-201ENST00000449839 135 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ATP5LP5-201ENST00000483050 299 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 RNU6-794P-201ENST00000517261 64 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 NARSP2-201ENST00000518524 679 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 LSM3P2-201ENST00000551246 273 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC063950.1-201ENST00000552036 308 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC245389.1-201ENST00000605141 529 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 uc_338.11-201ENST00000619132 160 ntBASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIMD1Q9UGP4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC022819.1-201ENST00000563495 3910 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 KARSP2-201ENST00000415696 1639 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 OR1S2-201ENST00000302592 978 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 HSPE1P11-201ENST00000339579 310 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 RNU6-552P-201ENST00000362869 119 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 RNU5E-8P-201ENST00000363502 116 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 MIR558-201ENST00000384920 94 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC074085.1-201ENST00000413598 418 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC092832.1-201ENST00000422934 400 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC005517.2-201ENST00000424673 553 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 MED13P1-201ENST00000428342 171 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AL590233.1-201ENST00000430017 456 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC007679.3-201ENST00000434035 414 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AMYP1-201ENST00000440059 1023 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 COL11A2P1-205ENST00000441798 676 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC022415.1-202ENST00000486612 523 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC005726.1-201ENST00000494679 427 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC024558.1-201ENST00000505008 528 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 SNX18P23-201ENST00000510867 677 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC093303.1-201ENST00000514549 295 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC100784.1-201ENST00000522790 310 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC068993.1-201ENST00000546724 589 ntBASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.1□□□□□ -1.27
LIMD1Q9UGP4 ACTG1P15-201ENST00000570019 1063 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms