Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AL590139.1-201ENST00000416267 400 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC119751.6-201ENST00000416712 186 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC007394.1-201ENST00000421941 531 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 NPM1P24-201ENST00000428039 894 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 BTG3P1-201ENST00000435859 716 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC093720.1-201ENST00000505681 714 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC099522.1-202ENST00000514718 367 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC092851.1-201ENST00000535964 478 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 TVP23BP1-201ENST00000557500 617 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AP005901.4-201ENST00000577336 569 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC022884.3-201ENST00000579571 248 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 MIR4715-201ENST00000584117 79 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 VN1R79P-201ENST00000593540 513 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC020914.4-201ENST00000597690 277 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 FAM35DP-201ENST00000323387 2712 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RN7SKP103-201ENST00000363848 320 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 COX6B1P7-201ENST00000430845 235 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 EXTL2P1-201ENST00000446218 416 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 HMGB1P16-201ENST00000447155 540 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC009963.2-201ENST00000453431 138 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RPL7P1-201ENST00000468161 747 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC104629.2-201ENST00000468627 598 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RPL7P9-201ENST00000468715 747 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 CDH12P2-201ENST00000504393 298 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 SNORD116-26-201ENST00000516006 96 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RNA5SP143-201ENST00000516936 115 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC024940.4-201ENST00000605507 246 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AL096803.3-201ENST00000609032 532 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RN7SL722P-201ENST00000617780 284 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 RN7SL565P-201ENST00000618246 284 ntBASIC3.81□□□□□ -1.8
VAPAQ9P0L0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VAPAQ9P0L0 AP001486.2-201ENST00000561652 5113 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC083899.2-201ENST00000423285 1376 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 XIAPP3-201ENST00000312918 795 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 RNA5SP447-201ENST00000363749 119 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AL161909.1-201ENST00000397390 712 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC009965.2-201ENST00000425328 970 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 NPM1P34-201ENST00000428821 893 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 MTCO1P45-201ENST00000431457 267 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 RPL7P31-201ENST00000450192 724 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC041039.1-201ENST00000485656 536 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 RPL7P24-201ENST00000493052 752 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC025674.1-201ENST00000507074 324 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms