Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 AC073136.1-201ENST00000449426 2884 ntBASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 AC068870.1-201ENST00000563737 2455 ntBASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCM2LQ9NUG4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MTND4P5-201ENST00000435821 1374 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AF287957.1-201ENST00000607368 1595 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RNU4-21P-201ENST00000362802 126 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 DSTNP4-201ENST00000399472 474 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL078604.1-201ENST00000404609 466 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RN7SKP142-201ENST00000411236 328 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC073264.1-201ENST00000411508 416 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL031779.1-201ENST00000415663 330 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL953862.1-201ENST00000423016 168 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL049610.1-201ENST00000423374 372 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SDCBPP2-201ENST00000424643 885 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL627308.1-201ENST00000435693 821 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 TMX2P1-201ENST00000436507 708 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 YWHAZP8-201ENST00000436935 731 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 VN1R32P-201ENST00000452234 905 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC116337.2-201ENST00000477662 156 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 HMGN2P25-201ENST00000486956 268 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RPL32P9-201ENST00000487963 407 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC091912.1-201ENST00000511351 248 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MTCYBP43-201ENST00000513621 740 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MTCYBP20-201ENST00000524239 1129 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 PMS2P3-207ENST00000529061 717 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 OR4A12P-201ENST00000530847 918 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MIR4700-201ENST00000578311 74 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RN7SL290P-201ENST00000578661 300 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL589674.2-201ENST00000604304 337 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL031775.1-201ENST00000607014 887 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MIR6793-201ENST00000612376 63 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AC009878.1-201ENST00000621819 340 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL356266.1-201ENST00000623311 483 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL392088.2-201ENST00000637607 285 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 MTND5P24-201ENST00000438892 1767 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 AL079343.1-201ENST00000572358 1771 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 PHKBP1-201ENST00000450951 1951 ntBASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.31□□□□□ -1.56
CCM2LQ9NUG4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 MTCO1P14-201ENST00000441695 1559 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL078621.3-201ENST00000623707 2042 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms