Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC007529.1-201ENST00000418574 2178 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 MIR1251-201ENST00000408552 70 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 RCC2P2-201ENST00000422174 918 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 MRPL50P1-201ENST00000431951 384 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 NUTF2P3-201ENST00000448540 384 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 RNU6-1218P-201ENST00000458990 108 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 EIF2S2P4-201ENST00000461070 984 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 RAB9BP1-201ENST00000519581 626 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AP005901.4-201ENST00000577336 569 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 KPNA2P3-201ENST00000584190 848 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC110743.1-201ENST00000584870 478 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AL049844.2-201ENST00000604280 628 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC007423.1-201ENST00000605009 627 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 ARF4P1-201ENST00000605447 541 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.02□□□□□ -1.77
TREX1Q9NSU2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL136964.1-201ENST00000622038 2990 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC093311.1-201ENST00000506586 2021 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 GCNT6-201ENST00000379591 934 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 ENSAP1-201ENST00000392855 326 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 YWHAEP5-201ENST00000431545 765 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC083863.1-201ENST00000438811 231 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 TPT1P13-201ENST00000449760 499 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC239809.1-201ENST00000450470 217 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 RPL7P24-201ENST00000493052 752 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC135001.1-201ENST00000544546 283 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC023575.1-201ENST00000580510 358 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL096803.3-201ENST00000609032 532 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL445423.1-201ENST00000609941 536 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 MIR6868-201ENST00000611215 58 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC005962.2-201ENST00000611427 652 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC124312.6-202ENST00000623624 418 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AL356121.2-201ENST00000624715 780 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AC018555.1-201ENST00000567548 1980 ntBASIC4.01□□□□□ -1.77
TREX1Q9NSU2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.01□□□□□ -1.77
TREX1Q9NSU2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4□□□□□ -1.77
TREX1Q9NSU2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4□□□□□ -1.77
TREX1Q9NSU2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC027290.2-201ENST00000623210 18662 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 RNA5SP399-201ENST00000364003 117 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AL034374.1-201ENST00000406329 351 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC108032.1-201ENST00000416706 207 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AL807761.1-201ENST00000417622 171 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC092647.1-201ENST00000420654 287 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC115285.1-201ENST00000424879 736 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4□□□□□ -1.77
TREX1Q9NSU2 KCTD9P3-201ENST00000434597 1169 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 CACYBPP1-201ENST00000438592 684 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 RAB28P3-201ENST00000448325 597 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 RPS11P1-201ENST00000451072 473 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms