Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC022695.1-201ENST00000522089 237 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CISHQ9NSE2 CYCSP30-201ENST00000546447 172 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 CD24P2-201ENST00000565486 219 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC133552.5-201ENST00000604266 540 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AL390816.3-201ENST00000604527 1066 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC074276.2-201ENST00000619891 348 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CISHQ9NSE2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CISHQ9NSE2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
CISHQ9NSE2 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.76
CISHQ9NSE2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.09□□□□□ -1.76
CISHQ9NSE2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CISHQ9NSE2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 MIR30B-201ENST00000384850 88 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 FABP12P1-201ENST00000401911 322 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 KPNA2P2-201ENST00000419546 1489 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 YWHAEP5-201ENST00000431545 765 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AL356535.1-201ENST00000440335 398 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 YWHAQP9-201ENST00000445891 512 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AL451050.1-201ENST00000450126 415 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AL139099.1-201ENST00000497398 403 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC108941.1-201ENST00000502853 530 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC008802.1-201ENST00000519121 791 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC122134.1-201ENST00000565664 1104 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.08□□□□□ -1.76
CISHQ9NSE2 AL008729.2-201ENST00000606393 473 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 AC079684.1-201ENST00000621405 437 ntBASIC4.08□□□□□ -1.76
CISHQ9NSE2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CISHQ9NSE2 THAP12P8-201ENST00000447914 2115 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 AC005332.5-201ENST00000591222 2919 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CISHQ9NSE2 HLFP1-201ENST00000402375 499 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 TCEA1P4-201ENST00000415066 844 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 RPL7P2-201ENST00000427639 268 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 SNORA71B-202ENST00000439232 272 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 RPSAP41-201ENST00000439695 860 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 GAPDHP36-201ENST00000480688 918 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 RNA5SP208-201ENST00000516156 78 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 HSPE1P5-201ENST00000561489 272 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 AL137849.1-201ENST00000604767 169 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.07□□□□□ -1.76
CISHQ9NSE2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CISHQ9NSE2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CISHQ9NSE2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CISHQ9NSE2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC106901.1-201ENST00000425086 698 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 OR5AW1P-201ENST00000426334 1006 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 RN7SL132P-201ENST00000478131 296 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 TRBV12-2-201ENST00000489763 344 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 NPM1P41-201ENST00000512920 831 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC010342.1-201ENST00000514047 877 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 RNA5SP164-201ENST00000516533 110 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC087499.8-201ENST00000578406 226 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 MIR5685-201ENST00000579080 79 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms