Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC145207.9-201ENST00000623802 325 ntBASIC5.96□□□□□ -1.46
SSU72Q9NP77 AC021106.3-201ENST00000623925 531 ntBASIC5.96□□□□□ -1.46
SSU72Q9NP77 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 AC119744.1-201ENST00000454746 1715 ntBASIC5.96□□□□□ -1.46
SSU72Q9NP77 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 AC024560.2-201ENST00000507981 1497 ntBASIC5.96□□□□□ -1.46
SSU72Q9NP77 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.96□□□□□ -1.46
SSU72Q9NP77 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSU72Q9NP77 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC109446.4-201ENST00000623235 2755 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 OR5J1P-201ENST00000313544 939 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 Y_RNA.58-201ENST00000362807 102 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 Y_RNA.154-201ENST00000363624 102 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 RNY3P1-201ENST00000365085 102 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 RNY3-201ENST00000365484 102 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 RNU6-657P-201ENST00000383904 107 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 Y_RNA.490-201ENST00000384413 102 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AL121972.1-201ENST00000402023 252 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 MTND3P17-201ENST00000416968 344 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 RAD23BP1-201ENST00000421404 1227 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 MTND2P23-201ENST00000422990 651 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 SKP1P1-201ENST00000438081 489 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 MED28P3-201ENST00000444288 531 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AL356133.1-201ENST00000444762 372 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 RPL7AP52-201ENST00000458096 790 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC017015.1-201ENST00000477387 286 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 GM2AP2-201ENST00000491764 562 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC022325.1-201ENST00000502748 2199 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC093325.1-201ENST00000508378 326 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC093664.1-201ENST00000511779 289 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 RNU6-445P-201ENST00000516949 107 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC090515.3-201ENST00000560431 315 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC011840.5-201ENST00000582125 771 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 NANOGP3-201ENST00000605855 286 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AL080312.2-201ENST00000613001 630 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC096861.1-201ENST00000616652 240 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 MIR6807-201ENST00000621968 92 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 AC010401.2-201ENST00000575137 4934 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SSU72Q9NP77 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.95□□□□□ -1.46
SSU72Q9NP77 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSU72Q9NP77 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 GNG5P1-201ENST00000255500 204 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 OR9K1P-201ENST00000326513 941 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 OR10R3P-201ENST00000361688 942 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 OR52E6-202ENST00000379946 954 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 RNU6-1151P-201ENST00000384684 107 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 RN7SKP266-201ENST00000410232 287 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms