Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM4Q9C037 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM4Q9C037 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 RHEBP3-201ENST00000411920 351 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 RPS23P10-201ENST00000416185 486 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 OR6K4P-201ENST00000423179 955 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 SEC63P1-201ENST00000425785 1258 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC011998.1-201ENST00000433403 117 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 NDUFA5P1-201ENST00000433858 341 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 ACTR3P2-201ENST00000439585 1257 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 EIF4A1P11-201ENST00000451239 222 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 KCTD9P2-201ENST00000512203 1013 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 PSMB7P1-201ENST00000556349 514 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 ADAD1P2-201ENST00000588476 646 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AL034351.1-201ENST00000605288 668 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 CPHL1P-201ENST00000461341 3407 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM4Q9C037 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM4Q9C037 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 RPL23AP59-201ENST00000399415 461 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AL078604.1-201ENST00000404609 466 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC114814.2-201ENST00000419195 485 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AL356387.2-201ENST00000422272 243 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM4Q9C037 YME1L1P1-201ENST00000429435 297 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 RPS26P40-201ENST00000435209 294 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC099063.2-201ENST00000446360 662 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 IFNWP4-201ENST00000453148 294 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 HSPE1P22-201ENST00000456856 327 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 RPL7P49-201ENST00000471402 708 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC104763.1-201ENST00000475274 360 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 AL133372.1-201ENST00000493565 745 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC115286.1-201ENST00000604298 434 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 MIR6891-201ENST00000618788 93 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 LINC00622-201ENST00000562811 1570 ntBASIC4.26□□□□□ -1.73
TRIM4Q9C037 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TRIM4Q9C037 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 RNU1-63P-201ENST00000383902 164 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 MIR483-201ENST00000385070 76 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 RPL23AP38-201ENST00000423801 469 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC115285.1-201ENST00000424879 736 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC017083.1-201ENST00000428093 483 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 RPEP2-201ENST00000432149 701 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 GOT2P5-201ENST00000433995 546 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 AGGF1P3-201ENST00000493675 1213 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 DSTNP2-201ENST00000504533 515 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 NARSP2-201ENST00000518524 679 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC069200.1-201ENST00000609511 323 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms