Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL445437.1-201ENST00000623157 3087 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 USP9YP4-201ENST00000424401 1745 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL450992.3-201ENST00000413192 568 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 OR2X1P-201ENST00000421144 687 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC115285.1-201ENST00000424879 736 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 HSFY6P-201ENST00000445573 403 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 RPL38P1-201ENST00000460914 211 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 KRT19P6-201ENST00000510983 209 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC006499.6-201ENST00000511169 607 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 MIR5684-201ENST00000585074 65 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC010857.1-201ENST00000606398 594 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL731566.2-201ENST00000618971 317 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AC068724.3-201ENST00000625906 87 ntBASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ECHDC3Q96DC8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 SNORD65-201ENST00000391079 73 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 GSTM3P2-201ENST00000412746 530 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AL358472.1-201ENST00000431295 329 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 MTCO1P45-201ENST00000431457 267 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 C1DP3-201ENST00000455013 423 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC093267.1-201ENST00000489176 961 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 RNU7-143P-201ENST00000516781 65 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 MTND1P6-201ENST00000523621 946 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC007599.1-201ENST00000568688 1174 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 RNU4-89P-201ENST00000607443 133 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC026368.1-201ENST00000614934 690 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 ZYXP1-201ENST00000617638 118 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AC112484.5-201ENST00000624189 228 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AL356121.2-201ENST00000624715 780 ntBASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
ECHDC3Q96DC8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC134882.1-201ENST00000603738 1676 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RN7SKP227-201ENST00000364445 330 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RNA5SP515-201ENST00000364570 118 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RNA5SP513-201ENST00000364648 118 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RNU6-1279P-201ENST00000383917 103 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AP000357.1-201ENST00000409926 1165 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms