Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL160275.2-201ENST00000412010 394 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 CBX1P3-201ENST00000413296 527 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 RPL7P28-201ENST00000437739 740 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 AC025627.2-201ENST00000576220 160 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 SNORD91B-202ENST00000608459 222 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 AP005264.7-201ENST00000625003 745 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 SNORA60-201ENST00000362396 134 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 RNU1-44P-201ENST00000384453 163 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 RPS12P5-201ENST00000423449 371 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC005326.1-201ENST00000429197 123 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 RPL23AP65-201ENST00000475608 468 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC006077.1-201ENST00000604746 343 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC234782.5-201ENST00000617723 324 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 GVINP1-202ENST00000531871 7271 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AL121834.1-202ENST00000404494 277 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 RPL5P30-201ENST00000465511 891 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AL158196.1-201ENST00000616786 434 ntBASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ALMS1Q8TCU4 AL133268.1-201ENST00000405676 1401 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 Z97055.1-201ENST00000419730 712 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 FTLP19-201ENST00000433300 394 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RN7SKP289-201ENST00000517244 295 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 U3.26-201ENST00000391236 204 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RNA5SP146-201ENST00000410743 123 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 MIR1911-201ENST00000410783 80 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC002524.1-201ENST00000411687 547 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RAD23BP3-201ENST00000454157 1152 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 EIF4BP1-201ENST00000554881 351 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 YWHAEP5-201ENST00000431545 765 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC006511.1-201ENST00000470614 315 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RNA5SP399-201ENST00000364003 117 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 RSL24D1P3-201ENST00000449255 495 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 AC233280.2-201ENST00000603917 1070 ntBASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALMS1Q8TCU4 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms