Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC009159.2-201ENST00000617603 606 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 MIR6853-201ENST00000619642 74 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 OR6C71P-202ENST00000641886 1107 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
BEST3Q8N1M1 AC010928.1-201ENST00000592477 1447 ntBASIC4.46□□□□□ -1.69
BEST3Q8N1M1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BEST3Q8N1M1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BEST3Q8N1M1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
BEST3Q8N1M1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RNA5SP345-201ENST00000410646 108 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC016397.1-201ENST00000412463 242 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RSU1P3-201ENST00000412878 835 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 FAR2P2-201ENST00000413041 594 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 QRSL1P2-201ENST00000418582 964 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC027644.1-201ENST00000419595 298 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC069213.2-201ENST00000420238 366 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 OR2X1P-201ENST00000421144 687 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 GAPDHP49-201ENST00000421421 961 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 FAR2P4-202ENST00000425399 584 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC084290.1-201ENST00000434995 374 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RPL35AP21-201ENST00000437667 333 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC005154.2-201ENST00000438110 379 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 EEF1A1P39-201ENST00000440791 250 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC092809.1-201ENST00000441469 474 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AL591719.1-201ENST00000444669 744 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC112492.1-201ENST00000449607 712 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 TPMTP4-201ENST00000450749 678 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC009220.1-201ENST00000451614 275 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC243772.1-201ENST00000451620 410 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC093166.2-201ENST00000455969 1017 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RPS5P7-201ENST00000456664 608 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RN7SL354P-201ENST00000469282 294 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC073358.1-201ENST00000505671 684 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC098799.3-201ENST00000506095 438 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC105031.1-201ENST00000518550 476 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 IGJP1-201ENST00000522682 475 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 LRRC34P1-201ENST00000542742 915 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 GSTP1P1-201ENST00000548078 319 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC133555.2-201ENST00000550213 292 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC113368.1-201ENST00000603736 382 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC068313.1-201ENST00000604028 1008 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC008745.1-201ENST00000604064 271 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AL583856.2-201ENST00000606298 543 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 AC010329.2-201ENST00000595195 2737 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 BX005019.1-201ENST00000561881 1810 ntBASIC4.46□□□□□ -1.7
BEST3Q8N1M1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
BEST3Q8N1M1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 MFSD8-216ENST00000641147 4009 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL590240.1-201ENST00000334118 313 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 RNU6-636P-201ENST00000384598 107 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 Z75741.2-201ENST00000417272 1167 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 NIPA2P1-201ENST00000426223 976 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 RPL21P110-201ENST00000433345 446 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms