Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RAB43Q86YS6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 RNA5SP306-201ENST00000411087 107 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 RPS23P10-201ENST00000416185 486 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 RPL23AP4-201ENST00000427757 463 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 PRELID3BP10-201ENST00000431957 584 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4□□□□□ -1.77
RAB43Q86YS6 RPL23AP81-201ENST00000455252 467 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AC079804.1-201ENST00000461922 436 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 LARP7P4-201ENST00000481075 878 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4□□□□□ -1.77
RAB43Q86YS6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 HMGB1P23-201ENST00000518743 568 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4□□□□□ -1.77
RAB43Q86YS6 AC105233.3-201ENST00000531125 744 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4□□□□□ -1.77
RAB43Q86YS6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4□□□□□ -1.77
RAB43Q86YS6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 AC106785.1-201ENST00000565935 262 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4□□□□□ -1.77
RAB43Q86YS6 AL139286.1-201ENST00000604465 483 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 AL354984.3-201ENST00000604803 325 ntBASIC4□□□□□ -1.77
RAB43Q86YS6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
RAB43Q86YS6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAB43Q86YS6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 ASNSP1-201ENST00000518311 1939 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 SYT14P1-202ENST00000600441 1448 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 RNA5SP151-201ENST00000365632 117 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL078604.1-201ENST00000404609 466 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 MTND2P2-201ENST00000434633 945 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 CDC27P1-201ENST00000445384 715 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AC006326.1-201ENST00000445465 787 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL359073.1-201ENST00000448036 403 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 MTCO3P42-201ENST00000509488 518 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 MTCO3P39-201ENST00000514812 518 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 MIR2114-201ENST00000516645 80 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL360157.1-201ENST00000565962 87 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 MIR4286-201ENST00000580651 93 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AL160290.3-201ENST00000604869 165 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AP002360.3-201ENST00000607673 710 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 AC117490.2-201ENST00000610042 594 ntBASIC3.99□□□□□ -1.77
RAB43Q86YS6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAB43Q86YS6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RAB43Q86YS6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RAB43Q86YS6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB43Q86YS6 PNPT1P2-201ENST00000456768 2050 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 RNU1-85P-201ENST00000364127 164 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
RAB43Q86YS6 SNORA37-201ENST00000384504 129 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 ENSAP1-201ENST00000392855 326 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 AC025750.1-201ENST00000399891 379 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 YY1P1-201ENST00000427625 668 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 CDY14P-201ENST00000431260 1014 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 AC122718.1-201ENST00000439448 744 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 CDY12P-201ENST00000440679 1015 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 CDY13P-201ENST00000445813 1015 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 EEF1A1P1-201ENST00000447052 739 ntBASIC3.98□□□□□ -1.77
RAB43Q86YS6 MTND2P25-201ENST00000449028 610 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms