Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC007685.1-201ENST00000329806 452 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 HMGN2P8-201ENST00000391458 268 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AMZ2P2-201ENST00000406819 1057 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 PGBD4P8-201ENST00000412993 562 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AL157831.1-201ENST00000426134 473 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 RSL24D1P6-201ENST00000426934 401 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 CASP3P1-201ENST00000446037 609 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 MORF4L1P4-201ENST00000450245 976 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC010307.1-201ENST00000467206 836 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC105137.1-201ENST00000484355 562 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC28Q86X40 EIF1P6-201ENST00000600054 334 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 AL445567.2-201ENST00000618935 498 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AC000123.2-201ENST00000623124 461 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 AP003497.2-201ENST00000624220 967 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 BX005019.1-201ENST00000561881 1810 ntBASIC3.62□□□□□ -1.83
LRRC28Q86X40 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC28Q86X40 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC026951.1-201ENST00000559530 2459 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 RNU6-146P-201ENST00000384602 108 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 NRBF2P2-201ENST00000413087 861 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 RPL6P29-201ENST00000414863 865 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 MTCO3P20-201ENST00000454926 688 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 RPL23AP81-201ENST00000455252 467 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 RPL36AP13-201ENST00000457490 317 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC041039.1-201ENST00000485656 536 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 USP9YP5-201ENST00000511770 630 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 KCTD9P2-201ENST00000512203 1013 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 RNA5SP49-201ENST00000516450 115 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 RNA5SP73-201ENST00000516744 108 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AP003730.1-201ENST00000524605 285 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC011477.5-201ENST00000586571 259 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 ARF4P1-201ENST00000605447 541 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC28Q86X40 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 EXOC5P1-201ENST00000510543 1969 ntBASIC3.61□□□□□ -1.83
LRRC28Q86X40 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC28Q86X40 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 ST13P16-201ENST00000401760 781 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms