Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.66□□□□□ -1.5
FNDC3BQ53EP0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FNDC3BQ53EP0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
FNDC3BQ53EP0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.66□□□□□ -1.5
FNDC3BQ53EP0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FNDC3BQ53EP0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL031985.3-201ENST00000565390 2449 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC027228.2-201ENST00000567141 2154 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RNU6-433P-201ENST00000363216 104 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RNA5SP391-201ENST00000363456 119 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 Y_RNA.359-201ENST00000365498 102 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RNU6-441P-201ENST00000384545 106 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 Y_RNA.517-201ENST00000384551 106 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL009179.1-201ENST00000406085 265 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 HMGB1P11-201ENST00000413899 637 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC004448.2-201ENST00000422360 586 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RPL36P19-201ENST00000430744 301 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL365184.2-201ENST00000431139 435 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 EPS15P1-201ENST00000448836 336 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RPL12P39-201ENST00000455456 496 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 MTCO3P2-201ENST00000457365 171 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RNA5SP269-201ENST00000459032 137 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 FAM172BP-201ENST00000487497 1089 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC113430.1-201ENST00000506872 718 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AP002963.1-201ENST00000530590 184 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC007599.1-201ENST00000568688 1174 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 ZNF415P1-201ENST00000582279 1166 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC110743.1-201ENST00000584870 478 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC090181.2-201ENST00000602975 672 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC104785.1-201ENST00000603220 588 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC115286.1-201ENST00000604298 434 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 U1.25-201ENST00000614085 162 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC007786.3-201ENST00000615154 596 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AC015540.1-201ENST00000615828 501 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 AL121890.2-201ENST00000617644 465 ntBASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC3BQ53EP0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 AC235565.1-201ENST00000456962 1325 ntBASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 MTND4P4-201ENST00000439033 1366 ntBASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 MTND4P16-201ENST00000466108 1367 ntBASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC3BQ53EP0 AL592429.1-201ENST00000403909 1473 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 AL590763.1-201ENST00000398297 1545 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 AC011933.2-201ENST00000578539 2790 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 AC144833.1-201ENST00000567953 4089 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 RNU4-91P-201ENST00000364778 135 ntBASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC3BQ53EP0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms