Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN6P56747 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLDN6P56747 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLDN6P56747 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 AL451142.2-201ENST00000429076 2090 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLDN6P56747 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 RNA5SP146-201ENST00000410743 123 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 TPT1P2-201ENST00000413105 503 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 RPL21P91-201ENST00000429231 479 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 HMGB3P9-201ENST00000441799 583 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 AL157884.3-201ENST00000448273 1184 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN6P56747 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 DDX39BP2-208ENST00000453923 258 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 RPL23AP65-201ENST00000475608 468 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 AC108022.1-201ENST00000493466 478 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN6P56747 CCNG2P1-201ENST00000549521 1000 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN6P56747 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN6P56747 AL451086.1-201ENST00000605596 223 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
CLDN6P56747 AC116447.1-201ENST00000613153 453 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 AC012314.7-201ENST00000619693 93 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN6P56747 AC091905.2-201ENST00000623143 306 ntBASIC4.03□□□□□ -1.76
CLDN6P56747 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLDN6P56747 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN6P56747 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN6P56747 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.03□□□□□ -1.77
CLDN6P56747 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN6P56747 CASC19-204ENST00000641001 2055 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CLDN6P56747 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLDN6P56747 CDY14P-201ENST00000431260 1014 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN6P56747 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN6P56747 CDY12P-201ENST00000440679 1015 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AL357520.1-201ENST00000441557 453 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 CDY13P-201ENST00000445813 1015 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 CDY23P-201ENST00000451661 1014 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 PRSS3P4-201ENST00000453323 162 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 RPS29P19-201ENST00000479709 171 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AC104164.2-201ENST00000496953 495 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN6P56747 AL352979.3-201ENST00000553515 247 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 BMS1P7-201ENST00000602440 1052 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AF131215.7-201ENST00000602443 707 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AC008966.2-201ENST00000606157 453 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN6P56747 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 AC007546.2-201ENST00000623996 360 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 AC055839.1-201ENST00000634467 498 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 MAPK10-304ENST00000641341 3984 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN6P56747 AC000123.3-201ENST00000624029 4975 ntBASIC4.02□□□□□ -1.77
CLDN6P56747 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLDN6P56747 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN6P56747 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN6P56747 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN6P56747 Z95327.2-201ENST00000414579 1873 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN6P56747 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 RNU6-386P-201ENST00000362650 107 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN6P56747 MIR449B-201ENST00000384995 97 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 RN7SKP222-201ENST00000410651 315 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN6P56747 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN6P56747 AL691449.1-201ENST00000426570 421 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN6P56747 MTCYBP29-201ENST00000436327 1006 ntBASIC4.01□□□□□ -1.77
CLDN6P56747 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms