Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RPL23AP23-201ENST00000452590 471 ntBASIC3.97□□□□□ -1.77
LIM2P55344 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 AC099560.2-201ENST00000457554 255 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC107398.1-201ENST00000486904 505 ntBASIC3.97□□□□□ -1.77
LIM2P55344 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
LIM2P55344 AC026979.1-201ENST00000492525 396 ntBASIC3.97□□□□□ -1.77
LIM2P55344 CEACAMP10-202ENST00000495431 496 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 AC083829.1-201ENST00000503756 657 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC025554.1-201ENST00000505641 188 ntBASIC3.97□□□□□ -1.77
LIM2P55344 HIGD1AP5-201ENST00000529959 259 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC105233.3-201ENST00000531125 744 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.97□□□□□ -1.77
LIM2P55344 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.97□□□□□ -1.77
LIM2P55344 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.97□□□□□ -1.77
LIM2P55344 AC068714.1-201ENST00000559623 800 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.97□□□□□ -1.77
LIM2P55344 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 AL139395.1-201ENST00000603662 160 ntBASIC3.97□□□□□ -1.77
LIM2P55344 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.97□□□□□ -1.77
LIM2P55344 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.97□□□□□ -1.77
LIM2P55344 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AL445567.2-201ENST00000618935 498 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC005261.4-201ENST00000600047 1385 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC096656.1-201ENST00000623826 1364 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.97□□□□□ -1.77
LIM2P55344 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 HSPD1P11-201ENST00000508643 1702 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC009229.4-201ENST00000623854 1947 ntBASIC3.96□□□□□ -1.78
LIM2P55344 RPL32P3-201ENST00000359025 275 ntBASIC3.96□□□□□ -1.78
LIM2P55344 RNU6-304P-201ENST00000364855 107 ntBASIC3.96□□□□□ -1.78
LIM2P55344 SNORA68.2-201ENST00000391263 128 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC105402.1-201ENST00000413336 545 ntBASIC3.96□□□□□ -1.78
LIM2P55344 RPL23AP38-201ENST00000423801 469 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC073508.1-201ENST00000428866 656 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC074367.1-201ENST00000438685 1125 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.96□□□□□ -1.78
LIM2P55344 NUTF2P3-201ENST00000448540 384 ntBASIC3.96□□□□□ -1.78
LIM2P55344 MTND2P30-201ENST00000456663 382 ntBASIC3.96□□□□□ -1.78
LIM2P55344 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AF213884.1-201ENST00000488102 463 ntBASIC3.96□□□□□ -1.78
LIM2P55344 MTND3P24-201ENST00000506306 329 ntBASIC3.96□□□□□ -1.78
LIM2P55344 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
LIM2P55344 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.96□□□□□ -1.78
LIM2P55344 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 AP003730.1-201ENST00000524605 285 ntBASIC3.96□□□□□ -1.78
LIM2P55344 CYCSP29-201ENST00000533731 318 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.96□□□□□ -1.78
LIM2P55344 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.96□□□□□ -1.78
LIM2P55344 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
LIM2P55344 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.96□□□□□ -1.78
LIM2P55344 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 MIR3939-201ENST00000582614 106 ntBASIC3.96□□□□□ -1.78
LIM2P55344 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 AP001033.2-201ENST00000609701 1003 ntBASIC3.96□□□□□ -1.78
LIM2P55344 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIM2P55344 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 LARP1BP1-201ENST00000506036 1359 ntBASIC3.96□□□□□ -1.78
LIM2P55344 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
LIM2P55344 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 ZNF962P-201ENST00000443465 3140 ntBASIC3.96□□□□□ -1.78
LIM2P55344 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.96□□□□□ -1.78
LIM2P55344 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIM2P55344 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIM2P55344 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.96□□□□□ -1.78
LIM2P55344 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 KPNA2P2-201ENST00000419546 1489 ntBASIC3.95□□□□□ -1.78
LIM2P55344 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 NCSTNP1-201ENST00000406229 144 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AL353692.2-201ENST00000407054 335 ntBASIC3.95□□□□□ -1.78
LIM2P55344 RNU2-17P-201ENST00000410290 190 ntBASIC3.95□□□□□ -1.78
LIM2P55344 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
LIM2P55344 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.95□□□□□ -1.78
LIM2P55344 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 MORF4L1P7-201ENST00000426038 703 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms