Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPS27AP11-201ENST00000402798 447 ntBASIC5.16□□□□□ -1.58
COPB1P53618 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB1P53618 AC114755.2-201ENST00000413520 361 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 HIGD1AP12-201ENST00000427832 281 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 KATNBL1P3-201ENST00000443475 909 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AL592437.1-201ENST00000443781 492 ntBASIC5.16□□□□□ -1.58
COPB1P53618 RPL34P26-201ENST00000445636 354 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC068135.1-201ENST00000446164 246 ntBASIC5.16□□□□□ -1.58
COPB1P53618 EXTL2P1-201ENST00000446218 416 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AC010733.1-201ENST00000451515 401 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AL035407.2-201ENST00000454090 378 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.16□□□□□ -1.58
COPB1P53618 RN7SKP147-201ENST00000517154 244 ntBASIC5.16□□□□□ -1.58
COPB1P53618 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 GCSHP4-201ENST00000538792 439 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.16□□□□□ -1.58
COPB1P53618 DUX4L52-201ENST00000549363 777 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB1P53618 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 RPL21P7-201ENST00000557463 483 ntBASIC5.16□□□□□ -1.58
COPB1P53618 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.16□□□□□ -1.58
COPB1P53618 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 Z99497.2-201ENST00000603634 310 ntBASIC5.16□□□□□ -1.58
COPB1P53618 MIR6820-201ENST00000611508 62 ntBASIC5.16□□□□□ -1.58
COPB1P53618 AC009318.3-201ENST00000616916 503 ntBASIC5.16□□□□□ -1.58
COPB1P53618 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB1P53618 MIR1322-201ENST00000638013 71 ntBASIC5.16□□□□□ -1.58
COPB1P53618 EOGT-210ENST00000615922 1931 ntBASIC5.16□□□□□ -1.58
COPB1P53618 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 AC111188.2-201ENST00000529697 1387 ntBASIC5.16□□□□□ -1.58
COPB1P53618 BTBD10P1-201ENST00000549824 1352 ntBASIC5.16□□□□□ -1.58
COPB1P53618 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPB1P53618 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.15□□□□□ -1.58
COPB1P53618 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COPB1P53618 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPB1P53618 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPB1P53618 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COPB1P53618 AL355852.1-201ENST00000454081 1771 ntBASIC5.15□□□□□ -1.58
COPB1P53618 METTL21EP-201ENST00000298105 713 ntBASIC5.15□□□□□ -1.59
COPB1P53618 RNU1-20P-201ENST00000363314 162 ntBASIC5.15□□□□□ -1.59
COPB1P53618 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.15□□□□□ -1.59
COPB1P53618 SNORD116-1-201ENST00000384335 95 ntBASIC5.15□□□□□ -1.59
COPB1P53618 RNU6-549P-201ENST00000384433 107 ntBASIC5.15□□□□□ -1.59
COPB1P53618 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 ERHP2-201ENST00000402323 299 ntBASIC5.15□□□□□ -1.59
COPB1P53618 SFR1P1-201ENST00000403720 688 ntBASIC5.15□□□□□ -1.59
COPB1P53618 HMGB3P18-201ENST00000406327 590 ntBASIC5.15□□□□□ -1.59
COPB1P53618 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC027644.1-201ENST00000419595 298 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC090960.1-201ENST00000421072 306 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 AL008629.1-201ENST00000438615 184 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC079168.2-201ENST00000453977 416 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC091685.2-201ENST00000454924 864 ntBASIC5.15□□□□□ -1.59
COPB1P53618 ATG12P2-201ENST00000456830 416 ntBASIC5.15□□□□□ -1.59
COPB1P53618 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 RN7SL817P-201ENST00000480777 288 ntBASIC5.15□□□□□ -1.59
COPB1P53618 RPS3AP22-201ENST00000488297 769 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 AC008565.1-201ENST00000509046 885 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC021146.3-201ENST00000511911 260 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.15□□□□□ -1.59
COPB1P53618 AC087373.1-201ENST00000524920 491 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 CYCSP28-201ENST00000534284 321 ntBASIC5.15□□□□□ -1.59
COPB1P53618 GSTP1P1-201ENST00000548078 319 ntBASIC5.15□□□□□ -1.59
COPB1P53618 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.15□□□□□ -1.59
COPB1P53618 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.15□□□□□ -1.59
COPB1P53618 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 SNORD39.2-201ENST00000579995 76 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
COPB1P53618 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 AL109653.1-201ENST00000603091 248 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AL445423.1-201ENST00000609941 536 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms