Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDX1P52945 AL603865.2-201ENST00000401679 213 ntBASIC4.43□□□□□ -1.7
PDX1P52945 MIR1271-201ENST00000408537 86 ntBASIC4.43□□□□□ -1.7
PDX1P52945 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.43□□□□□ -1.7
PDX1P52945 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.43□□□□□ -1.7
PDX1P52945 TCEA1P4-201ENST00000415066 844 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC093422.3-201ENST00000428506 305 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
PDX1P52945 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.43□□□□□ -1.7
PDX1P52945 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.43□□□□□ -1.7
PDX1P52945 TDGF1P1-201ENST00000445734 527 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC092685.1-201ENST00000447960 1243 ntBASIC4.43□□□□□ -1.7
PDX1P52945 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 AC008280.2-201ENST00000455473 307 ntBASIC4.43□□□□□ -1.7
PDX1P52945 CYCSP34-201ENST00000458172 304 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC104763.1-201ENST00000475274 360 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.43□□□□□ -1.7
PDX1P52945 AC015795.1-201ENST00000513669 327 ntBASIC4.43□□□□□ -1.7
PDX1P52945 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDX1P52945 AC084824.1-201ENST00000550917 1005 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC010735.1-201ENST00000567305 1026 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.43□□□□□ -1.7
PDX1P52945 ZNF92P3-201ENST00000596594 954 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC018754.1-201ENST00000607486 925 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC096586.1-201ENST00000610267 561 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.43□□□□□ -1.7
PDX1P52945 AC114781.5-201ENST00000615297 108 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AP005019.3-201ENST00000620418 560 ntBASIC4.43□□□□□ -1.7
PDX1P52945 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.43□□□□□ -1.7
PDX1P52945 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
PDX1P52945 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 ZNF849P-201ENST00000594711 1566 ntBASIC4.43□□□□□ -1.7
PDX1P52945 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.43□□□□□ -1.7
PDX1P52945 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDX1P52945 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.42□□□□□ -1.7
PDX1P52945 AC097461.1-201ENST00000568928 2821 ntBASIC4.42□□□□□ -1.7
PDX1P52945 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDX1P52945 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 RNU1-83P-201ENST00000363426 164 ntBASIC4.42□□□□□ -1.7
PDX1P52945 RNA5SP28-201ENST00000363841 119 ntBASIC4.42□□□□□ -1.7
PDX1P52945 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 SNORA57.1-201ENST00000391227 145 ntBASIC4.42□□□□□ -1.7
PDX1P52945 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 RAD23BP1-201ENST00000421404 1227 ntBASIC4.42□□□□□ -1.7
PDX1P52945 RPL7P57-201ENST00000423238 740 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 MTCO3P21-201ENST00000430791 643 ntBASIC4.42□□□□□ -1.7
PDX1P52945 KCTD10P1-201ENST00000434203 625 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 ARF4P4-201ENST00000439608 520 ntBASIC4.42□□□□□ -1.7
PDX1P52945 HSFY3P-201ENST00000444242 1191 ntBASIC4.42□□□□□ -1.7
PDX1P52945 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 AC005229.2-201ENST00000456995 399 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.42□□□□□ -1.7
PDX1P52945 SCARNA10-201ENST00000459255 330 ntBASIC4.42□□□□□ -1.7
PDX1P52945 RNA5SP103-201ENST00000459503 118 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC090142.1-201ENST00000465776 462 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC112206.1-201ENST00000468416 477 ntBASIC4.42□□□□□ -1.7
PDX1P52945 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.42□□□□□ -1.7
PDX1P52945 AC104687.1-201ENST00000485829 412 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC025164.1-201ENST00000496249 478 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC008427.1-201ENST00000503102 655 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AC118942.1-201ENST00000529674 1035 ntBASIC4.42□□□□□ -1.7
PDX1P52945 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.42□□□□□ -1.7
PDX1P52945 AC084759.1-201ENST00000561168 290 ntBASIC4.42□□□□□ -1.7
PDX1P52945 MIR1254-2-201ENST00000579553 63 ntBASIC4.42□□□□□ -1.7
PDX1P52945 MIR4760-201ENST00000585040 80 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.42□□□□□ -1.7
PDX1P52945 AL606834.3-201ENST00000602615 496 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC023813.4-201ENST00000607580 580 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC090912.3-201ENST00000609775 533 ntBASIC4.42□□□□□ -1.7
PDX1P52945 RNU6-1192P-201ENST00000612197 107 ntBASIC4.42□□□□□ -1.7
PDX1P52945 RNU6-489P-201ENST00000618289 107 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC022106.2-201ENST00000620114 757 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC023510.2-201ENST00000622162 746 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC006840.1-201ENST00000623069 542 ntBASIC4.42□□□□□ -1.7
PDX1P52945 U6.107-201ENST00000637108 79 ntBASIC4.42□□□□□ -1.7
PDX1P52945 AC013437.2-201ENST00000639587 677 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms