Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL21P133-201ENST00000443666 476 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 HSFY6P-201ENST00000445573 403 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD4P46934 AC239798.3-201ENST00000454459 408 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AC068587.1-201ENST00000483613 781 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.75□□□□□ -1.65
NEDD4P46934 HMGB1P47-201ENST00000511281 589 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD4P46934 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.75□□□□□ -1.65
NEDD4P46934 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD4P46934 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD4P46934 AL133247.2-201ENST00000603236 482 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AC067838.1-201ENST00000606064 577 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 RMST_5.1-201ENST00000618704 126 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AP003499.2-201ENST00000624100 483 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AL773545.4-201ENST00000637262 310 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AL513478.4-201ENST00000641636 310 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD4P46934 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NEDD4P46934 MIR448-201ENST00000362131 111 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD4P46934 PPIAP31-201ENST00000405422 495 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 UBE2V1P15-201ENST00000407776 448 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 RNA5SP104-201ENST00000410989 118 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AC092017.2-201ENST00000427600 362 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 MTND4LP7-201ENST00000431728 294 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AL606490.7-201ENST00000433136 191 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 RPL21P89-201ENST00000444021 467 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 VN1R48P-201ENST00000448149 1036 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AL157884.3-201ENST00000448273 1184 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.74□□□□□ -1.65
NEDD4P46934 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.74□□□□□ -1.65
NEDD4P46934 AP002345.1-201ENST00000456493 928 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AC092691.2-201ENST00000461787 803 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD4P46934 RNU6-889P-201ENST00000517189 103 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 RN7SL703P-201ENST00000578485 302 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.74□□□□□ -1.65
NEDD4P46934 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 OR4H6P-202ENST00000603819 340 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AC104662.1-201ENST00000604448 511 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 RPL21P136-201ENST00000605378 396 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.74□□□□□ -1.65
NEDD4P46934 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.74□□□□□ -1.65
NEDD4P46934 MFSD8-220ENST00000641243 1422 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NEDD4P46934 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NEDD4P46934 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD4P46934 AC010300.1-201ENST00000600671 5134 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD4P46934 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NEDD4P46934 MTND4P26-201ENST00000415971 1359 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD4P46934 DDX6P1-205ENST00000441966 1436 ntBASIC4.74□□□□□ -1.65
NEDD4P46934 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.73□□□□□ -1.65
NEDD4P46934 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 HMGB3P19-201ENST00000403971 560 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 AC012497.1-201ENST00000429392 575 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 RPS4XP15-201ENST00000489210 795 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 TPT1P3-201ENST00000492841 512 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 IGKV2-38-201ENST00000517443 247 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.73□□□□□ -1.65
NEDD4P46934 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.73□□□□□ -1.65
NEDD4P46934 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.73□□□□□ -1.65
NEDD4P46934 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.73□□□□□ -1.65
NEDD4P46934 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.73□□□□□ -1.65
NEDD4P46934 AC007423.1-201ENST00000605009 627 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 AC005972.3-201ENST00000606304 481 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.73□□□□□ -1.65
NEDD4P46934 AC092653.1-201ENST00000608509 531 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.73□□□□□ -1.65
NEDD4P46934 AC106730.3-201ENST00000624568 641 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 AP000720.1-201ENST00000625091 483 ntBASIC4.73□□□□□ -1.65
NEDD4P46934 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
NEDD4P46934 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD4P46934 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NEDD4P46934 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NEDD4P46934 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD4P46934 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 PTP4A1P1-201ENST00000420539 515 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 MTCO1P54-201ENST00000430139 712 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms