Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNA5SP341-201ENST00000516261 117 ntBASIC4.04□□□□□ -1.76
HTTP42858 AC008694.2-201ENST00000517591 306 ntBASIC4.04□□□□□ -1.76
HTTP42858 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HTTP42858 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 RNU1-140P-201ENST00000365040 165 ntBASIC4.03□□□□□ -1.76
HTTP42858 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.03□□□□□ -1.76
HTTP42858 AC087276.1-201ENST00000529659 480 ntBASIC4.03□□□□□ -1.76
HTTP42858 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.03□□□□□ -1.76
HTTP42858 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.03□□□□□ -1.76
HTTP42858 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.03□□□□□ -1.76
HTTP42858 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.03□□□□□ -1.76
HTTP42858 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HTTP42858 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HTTP42858 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 RPL31P61-201ENST00000496160 376 ntBASIC4.03□□□□□ -1.76
HTTP42858 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.03□□□□□ -1.76
HTTP42858 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.03□□□□□ -1.76
HTTP42858 CKS1BP3-201ENST00000600888 237 ntBASIC4.03□□□□□ -1.76
HTTP42858 AC009464.1-201ENST00000615731 469 ntBASIC4.03□□□□□ -1.76
HTTP42858 AC095038.2-201ENST00000621464 1070 ntBASIC4.03□□□□□ -1.76
HTTP42858 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HTTP42858 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
HTTP42858 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 AC020656.2-201ENST00000613291 5309 ntBASIC4.02□□□□□ -1.77
HTTP42858 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 ARF4P3-201ENST00000397387 509 ntBASIC4.02□□□□□ -1.77
HTTP42858 NPM1P25-201ENST00000429734 854 ntBASIC4.02□□□□□ -1.77
HTTP42858 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.02□□□□□ -1.77
HTTP42858 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.02□□□□□ -1.77
HTTP42858 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 AL355596.1-201ENST00000565399 3996 ntBASIC4.02□□□□□ -1.77
HTTP42858 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.02□□□□□ -1.77
HTTP42858 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 RNU6-7-201ENST00000364784 107 ntBASIC4.02□□□□□ -1.77
HTTP42858 RNU6-8-201ENST00000365467 107 ntBASIC4.02□□□□□ -1.77
HTTP42858 HSPE1P27-201ENST00000430808 296 ntBASIC4.02□□□□□ -1.77
HTTP42858 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.02□□□□□ -1.77
HTTP42858 AC091544.4-201ENST00000555268 342 ntBASIC4.02□□□□□ -1.77
HTTP42858 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 TUG1_1.1-201ENST00000610654 145 ntBASIC4.02□□□□□ -1.77
HTTP42858 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
HTTP42858 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HTTP42858 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
HTTP42858 FTLP6-201ENST00000355274 422 ntBASIC4.01□□□□□ -1.77
HTTP42858 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.01□□□□□ -1.77
HTTP42858 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.01□□□□□ -1.77
HTTP42858 COX6B1P6-201ENST00000522347 255 ntBASIC4.01□□□□□ -1.77
HTTP42858 AC008759.1-201ENST00000589783 983 ntBASIC4.01□□□□□ -1.77
HTTP42858 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
HTTP42858 PRNCR1-201ENST00000635449 12727 ntBASIC4.01□□□□□ -1.77
HTTP42858 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.01□□□□□ -1.77
HTTP42858 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 AC126323.6-202ENST00000568092 3511 ntBASIC4.01□□□□□ -1.77
HTTP42858 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HTTP42858 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.01□□□□□ -1.77
HTTP42858 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 AC005002.1-201ENST00000447458 540 ntBASIC4.01□□□□□ -1.77
HTTP42858 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.01□□□□□ -1.77
HTTP42858 AL121594.4-201ENST00000556211 1196 ntBASIC4.01□□□□□ -1.77
HTTP42858 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC4.01□□□□□ -1.77
HTTP42858 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4□□□□□ -1.77
HTTP42858 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms