Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX3P41225 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX3P41225 AC115286.1-201ENST00000604298 434 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AP002802.2-201ENST00000605877 235 ntBASIC4.19□□□□□ -1.74
SOX3P41225 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SOX3P41225 AC023510.2-201ENST00000622162 746 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AC010608.3-201ENST00000625048 527 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AP003485.1-201ENST00000625093 753 ntBASIC4.19□□□□□ -1.74
SOX3P41225 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SOX3P41225 LINC01808-202ENST00000641680 1116 ntBASIC4.19□□□□□ -1.74
SOX3P41225 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SOX3P41225 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 GTF2H2B-203ENST00000508065 1432 ntBASIC4.19□□□□□ -1.74
SOX3P41225 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
SOX3P41225 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 RNU5B-4P-201ENST00000363508 111 ntBASIC4.18□□□□□ -1.74
SOX3P41225 U3.22-201ENST00000391120 215 ntBASIC4.18□□□□□ -1.74
SOX3P41225 SDHCP2-201ENST00000398565 501 ntBASIC4.18□□□□□ -1.74
SOX3P41225 RPS24P12-201ENST00000402084 394 ntBASIC4.18□□□□□ -1.74
SOX3P41225 ELOCP19-201ENST00000411919 318 ntBASIC4.18□□□□□ -1.74
SOX3P41225 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX3P41225 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 PTP4A1P7-201ENST00000423476 514 ntBASIC4.18□□□□□ -1.74
SOX3P41225 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC011242.1-201ENST00000433596 1158 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX3P41225 AL096803.2-201ENST00000450032 677 ntBASIC4.18□□□□□ -1.74
SOX3P41225 RPS26P28-201ENST00000470806 348 ntBASIC4.18□□□□□ -1.74
SOX3P41225 NDUFA5P9-201ENST00000472609 340 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC104982.1-201ENST00000478775 574 ntBASIC4.18□□□□□ -1.74
SOX3P41225 HMGB1P38-201ENST00000490557 577 ntBASIC4.18□□□□□ -1.74
SOX3P41225 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX3P41225 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX3P41225 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX3P41225 AC092593.2-201ENST00000513866 913 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC108471.1-201ENST00000513977 287 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC034205.1-201ENST00000520621 638 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC009643.1-201ENST00000532030 391 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC022882.1-201ENST00000532142 501 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX3P41225 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SOX3P41225 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX3P41225 AC010735.1-201ENST00000567305 1026 ntBASIC4.18□□□□□ -1.74
SOX3P41225 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 AL008729.2-201ENST00000606393 473 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC012409.3-201ENST00000611343 981 ntBASIC4.18□□□□□ -1.74
SOX3P41225 RNU6-1192P-201ENST00000612197 107 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AL121873.1-201ENST00000616013 524 ntBASIC4.18□□□□□ -1.74
SOX3P41225 RNU6-489P-201ENST00000618289 107 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AL512427.1-201ENST00000618593 349 ntBASIC4.18□□□□□ -1.74
SOX3P41225 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SOX3P41225 AC013437.2-201ENST00000639587 677 ntBASIC4.18□□□□□ -1.74
SOX3P41225 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 VN2R3P-201ENST00000422626 1412 ntBASIC4.18□□□□□ -1.74
SOX3P41225 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX3P41225 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX3P41225 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SOX3P41225 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SOX3P41225 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SOX3P41225 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SOX3P41225 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SOX3P41225 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 SNORA72.3-201ENST00000365074 132 ntBASIC4.17□□□□□ -1.74
SOX3P41225 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SOX3P41225 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 AP000357.1-201ENST00000409926 1165 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC096533.1-201ENST00000411645 353 ntBASIC4.17□□□□□ -1.74
SOX3P41225 VN1R51P-201ENST00000411675 945 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC013404.1-201ENST00000413068 249 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX3P41225 TCEA1P2-201ENST00000420496 906 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms